X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignViewport.java;h=d0a0f11e28a5cc9f93d5f54991a2c879ee08c816;hb=ee5718cb9339243dd47eeb410fe101217859c2ff;hp=f755b25b83823ce1ec9105b63c365f143598be77;hpb=37e1fa33b20cd2fb68cb7f72c15784897cb8a6b1;p=jalview.git diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java index f755b25..d0a0f11 100644 --- a/src/jalview/gui/AlignViewport.java +++ b/src/jalview/gui/AlignViewport.java @@ -18,24 +18,6 @@ * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ -/* - * Jalview - A Sequence Alignment Editor and Viewer - * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 - * of the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA - */ package jalview.gui; import jalview.analysis.AlignmentUtils; @@ -676,7 +658,8 @@ public class AlignViewport extends AlignmentViewport implements List choosenSeqs = new ArrayList(); for (SequenceI sq : alignment.getSequences()) { - Vector pdbRefEntries = sq.getDatasetSequence().getAllPDBEntries(); + Vector pdbRefEntries = sq.getDatasetSequence() + .getAllPDBEntries(); if (pdbRefEntries == null) { continue; @@ -708,7 +691,8 @@ public class AlignViewport extends AlignmentViewport implements } } } - seqvectors.add(choosenSeqs.toArray(new SequenceI[choosenSeqs.size()])); + seqvectors + .add(choosenSeqs.toArray(new SequenceI[choosenSeqs.size()])); } return seqvectors.toArray(new SequenceI[seqvectors.size()][]); }