X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignViewport.java;h=f95179203d2bf94f45d5b4d2f0572c1838a32935;hb=95a46891288f4fc63d690cab4f56879678f54fb6;hp=dd3f980abe33efb7555d277bca01e3c69eba48a3;hpb=1402060fb2ca7b2639ef98da3e22766d01149b16;p=jalview.git

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index dd3f980..f951792 100755
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -1039,12 +1039,9 @@ public class AlignViewport
     {
       ignoreGapsInConsensusCalculation = b;
       updateConsensus();
-      if(globalColourScheme!=null && globalColourScheme instanceof ResidueColourScheme)
+      if(globalColourScheme!=null)
       {
-        ((ResidueColourScheme) globalColourScheme).setThreshold(
-            ((ResidueColourScheme) globalColourScheme).getThreshold(), ignoreGapsInConsensusCalculation);
-
-
+        globalColourScheme.setThreshold(globalColourScheme.getThreshold(), ignoreGapsInConsensusCalculation);
       }
 
     }