X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignmentPanel.java;h=04b596a0aea36d7f200b1e8c69bdf3c499ef59d9;hb=4532dfefeac026198bfea1b9dbe84186e870bfc8;hp=248fb3dfdd44159dfd9368b953798e5457e50699;hpb=c59fb56cb143b05c5643a71f5b39996ac1cd2fef;p=jalview.git

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index 248fb3d..04b596a 100755
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -280,7 +280,6 @@ public class AlignmentPanel extends GAlignmentPanel implements AdjustmentListene
        return false;
       vscroll.setValue(vscroll.getValue() + 1);
     }
-
     return true;
   }
 
@@ -333,6 +332,8 @@ public class AlignmentPanel extends GAlignmentPanel implements AdjustmentListene
 
   public void adjustmentValueChanged(AdjustmentEvent evt)
   {
+    int oldX = av.getStartRes();
+    int oldY = av.getStartSeq();
 
     if (evt.getSource() == hscroll)
     {
@@ -359,7 +360,10 @@ public class AlignmentPanel extends GAlignmentPanel implements AdjustmentListene
     if(overviewPanel!=null)
       overviewPanel.setBoxPosition();
 
-    repaint();
+    seqPanel.seqCanvas.fastPaint(av.getStartRes()-oldX, av.getStartSeq()-oldY);
+    idPanel.idCanvas.fastPaint( av.getStartSeq()-oldY );
+    scalePanel.repaint();
+    annotationPanel.fastPaint(av.getStartRes()-oldX);
 
   }