X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignmentPanel.java;h=2536d47bec508658c95278480069fe493742460e;hb=584c1b0136786968958e22e52b6ce51bd24511e5;hp=25f44c59f824b69870b2b9fe49d9860b21141e0d;hpb=be762d8d9c71a7aa3121e845c45911c7192b7827;p=jalview.git

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index 25f44c5..2536d47 100644
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -231,7 +231,8 @@ public class AlignmentPanel extends GAlignmentPanel implements
             new Dimension(10, av.getCharHeight() + fm.getDescent()));
     idSpaceFillerPanel1.setPreferredSize(
             new Dimension(10, av.getCharHeight() + fm.getDescent()));
-
+    idwidthAdjuster.invalidate();
+    scalePanelHolder.invalidate();
     getIdPanel().getIdCanvas().gg = null;
     getSeqPanel().seqCanvas.img = null;
     getAnnotationPanel().adjustPanelHeight();
@@ -242,11 +243,6 @@ public class AlignmentPanel extends GAlignmentPanel implements
     getIdPanel().getIdCanvas().setPreferredSize(d);
     hscrollFillerPanel.setPreferredSize(d);
 
-    if (this.alignFrame.getSplitViewContainer() != null)
-    {
-      ((SplitFrame) this.alignFrame.getSplitViewContainer()).adjustLayout();
-    }
-
     repaint();
   }
 
@@ -636,9 +632,9 @@ public class AlignmentPanel extends GAlignmentPanel implements
       }
       else
       {
-        int widthInRes = (canvasWidth / av.getCharWidth()) - 1;
+        int widthInRes = (canvasWidth / av.getCharWidth());
         int heightInSeq = (getSeqPanel().seqCanvas.getHeight()
-                / av.getCharHeight()) - 1;
+                / av.getCharHeight());
 
         vpRanges.setViewportWidth(widthInRes);
         vpRanges.setViewportHeight(heightInSeq);
@@ -1100,8 +1096,8 @@ public class AlignmentPanel extends GAlignmentPanel implements
      * single graphics context), then reset to (0, scale height)
      */
     alignmentGraphics.translate(alignmentGraphicsOffset, scaleHeight);
-    getSeqPanel().seqCanvas.drawPanel(alignmentGraphics, startRes, endRes,
-            startSeq, endSeq, 0);
+    getSeqPanel().seqCanvas.drawPanelForPrinting(alignmentGraphics, startRes,
+            endRes, startSeq, endSeq);
     alignmentGraphics.translate(-alignmentGraphicsOffset, 0);
 
     if (av.isShowAnnotation() && (endSeq == alignmentHeight))
@@ -1228,7 +1224,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
 
     pg.translate(idWidth, 0);
 
-    getSeqPanel().seqCanvas.drawWrappedPanel(pg, pwidth - idWidth,
+    getSeqPanel().seqCanvas.drawWrappedPanelForPrinting(pg, pwidth - idWidth,
             totalHeight, 0);
 
     if ((pi * pheight) < totalHeight)