X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignmentPanel.java;h=ce87c01785119785c4123c42961e5653e8c4bd98;hb=8dca84768d848bc368985a8f0938a6c7ac059952;hp=ee714833ff6ac0c4792f66efbb375637e0bf86d6;hpb=163eca0e8ab247f095a9d4dcbb9af20ea195e74d;p=jalview.git

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index ee71483..ce87c01 100644
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -340,8 +340,8 @@ public class AlignmentPanel extends GAlignmentPanel implements
     {
       if (Jalview.isHeadlessMode())
       {
-        AnnotationLabels aal = this.getAlabels();
-        int stringWidth = aal.drawLabels(null, false, idWidth, false, fm);
+        AnnotationLabels aal = getAlabels();
+        int stringWidth = aal.drawLabels(null, false, idWidth, false, false, fm);
         idWidth = Math.max(idWidth, stringWidth);
       }
       else
@@ -1064,7 +1064,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
     List<SequenceI> selection = av.getSelectionGroup() == null ? null
             : av.getSelectionGroup().getSequences(null);
     idCanvas.drawIds((Graphics2D) idGraphics, av, startSeq, endSeq - 1,
-            selection);
+            selection, false);
 
     idGraphics.setFont(av.getFont());
     idGraphics.translate(0, -scaleHeight);
@@ -1088,7 +1088,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
       int offset = getAlabels().getScrollOffset();
       idGraphics.translate(0, -offset);
       idGraphics.translate(0, alignmentDrawnHeight);
-      getAlabels().drawComponent(idGraphics, idWidth);
+      getAlabels().drawComponentNotGUI(idGraphics, idWidth);
       idGraphics.translate(0, -alignmentDrawnHeight);
 
       /*
@@ -1169,7 +1169,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
      * draw sequence ids and annotation labels (if shown)
      */
     IdCanvas idCanvas = getIdPanel().getIdCanvas();
-    idCanvas.drawIdsWrapped((Graphics2D) g, av, 0, totalHeight);
+    idCanvas.drawIdsWrappedNoGUI((Graphics2D) g, av, 0, totalHeight);
 
     g.translate(idWidth, 0);