X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignmentPanel.java;h=d2670f452a4a14dd9c9a5c56ea44e0899ca9556a;hb=a3b4ec9805c4cee4c2dbe2a4c98913ee9c189c6b;hp=cdac5b4a82884c512877ebb9d902962c0c5540dc;hpb=611f5c1df3da7e7faeaaec5224785cdcd642344a;p=jalview.git diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java index cdac5b4..d2670f4 100644 --- a/src/jalview/gui/AlignmentPanel.java +++ b/src/jalview/gui/AlignmentPanel.java @@ -20,22 +20,38 @@ */ package jalview.gui; -import java.beans.*; -import java.io.*; - -import java.awt.*; -import java.awt.event.*; -import java.awt.print.*; -import javax.swing.*; - import jalview.api.AlignmentViewPanel; import jalview.bin.Cache; -import jalview.datamodel.*; -import jalview.jbgui.*; -import jalview.schemes.*; +import jalview.datamodel.AlignmentI; +import jalview.datamodel.SearchResults; +import jalview.datamodel.SequenceFeature; +import jalview.datamodel.SequenceGroup; +import jalview.datamodel.SequenceI; +import jalview.jbgui.GAlignmentPanel; +import jalview.schemes.ResidueProperties; import jalview.structure.StructureSelectionManager; import jalview.util.MessageManager; +import java.awt.BorderLayout; +import java.awt.Color; +import java.awt.Container; +import java.awt.Dimension; +import java.awt.Font; +import java.awt.FontMetrics; +import java.awt.Graphics; +import java.awt.event.AdjustmentEvent; +import java.awt.event.AdjustmentListener; +import java.awt.print.PageFormat; +import java.awt.print.Printable; +import java.awt.print.PrinterException; +import java.beans.PropertyChangeEvent; +import java.beans.PropertyChangeListener; +import java.io.File; +import java.io.FileWriter; +import java.io.PrintWriter; + +import javax.swing.SwingUtilities; + /** * DOCUMENT ME! * @@ -179,7 +195,7 @@ public class AlignmentPanel extends GAlignmentPanel implements int afwidth = (alignFrame != null ? alignFrame.getWidth() : 300); int maxwidth = Math.max(20, - Math.min(afwidth - 200, (int) 2 * afwidth / 3)); + Math.min(afwidth - 200, 2 * afwidth / 3)); return calculateIdWidth(maxwidth); } @@ -841,7 +857,7 @@ public class AlignmentPanel extends GAlignmentPanel implements // / How many sequences and residues can we fit on a printable page? int totalRes = (pwidth - idWidth) / av.getCharWidth(); - int totalSeq = (int) ((pheight - scaleHeight) / av.getCharHeight()) - 1; + int totalSeq = (pheight - scaleHeight) / av.getCharHeight() - 1; int pagesWide = (av.getAlignment().getWidth() / totalRes) + 1; @@ -954,10 +970,10 @@ public class AlignmentPanel extends GAlignmentPanel implements int offset = -alabels.scrollOffset; pg.translate(0, offset); pg.translate(-idWidth - 3, (endSeq - startSeq) * av.charHeight + 3); - alabels.drawComponent((Graphics2D) pg, idWidth); + alabels.drawComponent(pg, idWidth); pg.translate(idWidth + 3, 0); annotationPanel.renderer.drawComponent(annotationPanel, av, - (Graphics2D) pg, -1, startRes, endRes + 1); + pg, -1, startRes, endRes + 1); pg.translate(0, -offset); } @@ -1113,14 +1129,17 @@ public class AlignmentPanel extends GAlignmentPanel implements return idwidth.intValue() + 4; } - void makeAlignmentImage(int type, File file) + void makeAlignmentImage(jalview.util.ImageMaker.TYPE type, File file) { long progress = System.currentTimeMillis(); boolean headless = (System.getProperty("java.awt.headless") != null && System .getProperty("java.awt.headless").equals("true")); if (alignFrame != null && !headless) { - alignFrame.setProgressBar(MessageManager.formatMessage("status.saving_file", new String[]{(type == jalview.util.ImageMaker.PNG ? MessageManager.getString("label.png_image") : MessageManager.getString("label.eps_file"))}), progress); + alignFrame.setProgressBar(MessageManager.formatMessage( + "status.saving_file", + new String[] + { type.getLabel() }), progress); } try { @@ -1164,16 +1183,22 @@ public class AlignmentPanel extends GAlignmentPanel implements jalview.util.ImageMaker im; final String imageAction, imageTitle; - if (type == jalview.util.ImageMaker.PNG) + if (type == jalview.util.ImageMaker.TYPE.PNG) { imageAction = "Create PNG image from alignment"; imageTitle = null; } - else + else if (type == jalview.util.ImageMaker.TYPE.EPS) { imageAction = "Create EPS file from alignment"; imageTitle = alignFrame.getTitle(); } + else + { + imageAction = "Create SVG file from alignment"; + imageTitle = alignFrame.getTitle(); + } + im = new jalview.util.ImageMaker(this, type, imageAction, width, height, file, imageTitle); if (av.getWrapAlignment()) @@ -1217,7 +1242,7 @@ public class AlignmentPanel extends GAlignmentPanel implements */ public void makeEPS(File epsFile) { - makeAlignmentImage(jalview.util.ImageMaker.EPS, epsFile); + makeAlignmentImage(jalview.util.ImageMaker.TYPE.EPS, epsFile); } /** @@ -1225,9 +1250,13 @@ public class AlignmentPanel extends GAlignmentPanel implements */ public void makePNG(File pngFile) { - makeAlignmentImage(jalview.util.ImageMaker.PNG, pngFile); + makeAlignmentImage(jalview.util.ImageMaker.TYPE.PNG, pngFile); } + public void makeSVG(File svgFile) + { + makeAlignmentImage(jalview.util.ImageMaker.TYPE.SVG, svgFile); + } public void makePNGImageMap(File imgMapFile, String imageName) { // /////ONLY WORKS WITH NONE WRAPPED ALIGNMENTS