X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAnnotationExporter.java;fp=src%2Fjalview%2Fgui%2FAnnotationExporter.java;h=e966c92161916ce48a574a649c6ec4dd0c1c8152;hb=ffea8e06f34c1004671749a799722f64a83d8161;hp=c68b2b15d62f143a498a86852df7594fff351c46;hpb=cca50cb3aee94f3ed1a5e504d45b8d8b665f8c5b;p=jalview.git

diff --git a/src/jalview/gui/AnnotationExporter.java b/src/jalview/gui/AnnotationExporter.java
index c68b2b1..e966c92 100644
--- a/src/jalview/gui/AnnotationExporter.java
+++ b/src/jalview/gui/AnnotationExporter.java
@@ -20,16 +20,32 @@
  */
 package jalview.gui;
 
-import java.util.*;
+import jalview.datamodel.AlignmentAnnotation;
+import jalview.datamodel.SequenceGroup;
+import jalview.io.AnnotationFile;
+import jalview.io.FeaturesFile;
+import jalview.io.JalviewFileChooser;
+import jalview.io.JalviewFileView;
+import jalview.util.MessageManager;
+
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.FlowLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+import java.util.Enumeration;
+import java.util.Hashtable;
 import java.util.List;
 
-import java.awt.*;
-import java.awt.event.*;
-import javax.swing.*;
-
-import jalview.datamodel.*;
-import jalview.io.*;
-import jalview.util.MessageManager;
+import javax.swing.BorderFactory;
+import javax.swing.ButtonGroup;
+import javax.swing.JButton;
+import javax.swing.JInternalFrame;
+import javax.swing.JLabel;
+import javax.swing.JLayeredPane;
+import javax.swing.JPanel;
+import javax.swing.JRadioButton;
+import javax.swing.SwingConstants;
 
 /**
  * 
@@ -210,11 +226,12 @@ public class AnnotationExporter extends JPanel
   private Hashtable getDisplayedFeatureCols()
   {
     Hashtable fcols = new Hashtable();
-    if (ap.av.featuresDisplayed == null)
+    if (ap.av.getFeaturesDisplayed() == null)
     {
       return fcols;
     }
-    Enumeration en = ap.av.featuresDisplayed.keys();
+
+    Enumeration en = ap.av.getFeaturesDisplayed().keys();
     FeatureRenderer fr = ap.getSeqPanel().seqCanvas.getFeatureRenderer(); // consider
                                                                      // higher
                                                                      // level