X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAnnotationLabels.java;h=de69907afe4b140604a8092a502e40732a9fcb03;hb=9907d58721e88d7546d5f9d441b575573ae00a9a;hp=d07cae270ebb4f259e8a21a7427f889fb8e9695e;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git

diff --git a/src/jalview/gui/AnnotationLabels.java b/src/jalview/gui/AnnotationLabels.java
index d07cae2..de69907 100755
--- a/src/jalview/gui/AnnotationLabels.java
+++ b/src/jalview/gui/AnnotationLabels.java
@@ -266,9 +266,7 @@ public class AnnotationLabels extends JPanel
     }
     else if (evt.getActionCommand().equals(OUTPUT_TEXT))
     {
-      new AnnotationExporter().exportAnnotations(ap,
-              new AlignmentAnnotation[]
-              { aa[selectedRow] });
+      new AnnotationExporter(ap).exportAnnotation(aa[selectedRow]);
     }
     else if (evt.getActionCommand().equals(COPYCONS_SEQ))
     {
@@ -705,7 +703,7 @@ public class AnnotationLabels extends JPanel
         d = ap.annotationSpaceFillerHolder.getPreferredSize();
         ap.annotationSpaceFillerHolder
                 .setPreferredSize(new Dimension(d.width, d.height - dif));
-        ap.paintAlignment(true);
+        ap.paintAlignment(true, false);
       }
 
       ap.addNotify();
@@ -855,7 +853,7 @@ public class AnnotationLabels extends JPanel
               }
             }
 
-            ap.paintAlignment(false);
+            ap.paintAlignment(false, false);
             PaintRefresher.Refresh(ap, ap.av.getSequenceSetId());
             ap.av.sendSelection();
           }
@@ -912,7 +910,7 @@ public class AnnotationLabels extends JPanel
               sg.addSequence(aa[selectedRow].sequenceRef, false);
             }
             ap.av.setSelectionGroup(sg);
-            ap.paintAlignment(false);
+            ap.paintAlignment(false, false);
             PaintRefresher.Refresh(ap, ap.av.getSequenceSetId());
             ap.av.sendSelection();
           }