X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAnnotationPanel.java;h=48e048373badbadf01c121a3243fc8de5730c980;hb=8d113b111f2f1aa1376c84efb4337751ddfeb092;hp=c9d65fab2b447c4e44963e114dab66f2348eafae;hpb=53507580ea0d347514d4f5e092a4d3d815609b9e;p=jalview.git

diff --git a/src/jalview/gui/AnnotationPanel.java b/src/jalview/gui/AnnotationPanel.java
index c9d65fa..48e0483 100755
--- a/src/jalview/gui/AnnotationPanel.java
+++ b/src/jalview/gui/AnnotationPanel.java
@@ -670,7 +670,7 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
       }
       graphStretchY = evt.getY();
       adjustPanelHeight();
-      ap.paintAlignment(true);
+      ap.paintAlignment(false, false);
     }
     else
     {
@@ -904,6 +904,8 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
   @Override
   public void paintComponent(Graphics g)
   {
+    super.paintComponent(g);
+
     g.setColor(Color.white);
     g.fillRect(0, 0, getWidth(), getHeight());