X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAnnotationPanel.java;h=abe92bbabb4f691f41ce4c7ee3ba8aba5a466c8a;hb=90ff735f876d7064f1f24925874fd7f41f94c7ac;hp=c9d65fab2b447c4e44963e114dab66f2348eafae;hpb=53507580ea0d347514d4f5e092a4d3d815609b9e;p=jalview.git

diff --git a/src/jalview/gui/AnnotationPanel.java b/src/jalview/gui/AnnotationPanel.java
index c9d65fa..abe92bb 100755
--- a/src/jalview/gui/AnnotationPanel.java
+++ b/src/jalview/gui/AnnotationPanel.java
@@ -670,7 +670,7 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
       }
       graphStretchY = evt.getY();
       adjustPanelHeight();
-      ap.paintAlignment(true);
+      ap.paintAlignment(false, false);
     }
     else
     {
@@ -904,6 +904,8 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
   @Override
   public void paintComponent(Graphics g)
   {
+    super.paintComponent(g);
+
     g.setColor(Color.white);
     g.fillRect(0, 0, getWidth(), getHeight());
 
@@ -992,10 +994,8 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
     int er = av.getRanges().getEndRes() + 1;
     int transX = 0;
 
-    long stime = System.currentTimeMillis();
     gg.copyArea(0, 0, imgWidth, getHeight(),
             -horizontal * av.getCharWidth(), 0);
-    long mtime = System.currentTimeMillis();
 
     if (horizontal > 0) // scrollbar pulled right, image to the left
     {
@@ -1012,17 +1012,9 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
     drawComponent(gg, sr, er);
 
     gg.translate(-transX, 0);
-    long dtime = System.currentTimeMillis();
+
     fastPaint = true;
     repaint();
-    long rtime = System.currentTimeMillis();
-    if (debugRedraw)
-    {
-      System.err.println("Scroll:\t" + horizontal + "\tCopyArea:\t"
-              + (mtime - stime) + "\tDraw component:\t" + (dtime - mtime)
-              + "\tRepaint call:\t" + (rtime - dtime));
-    }
-
   }
 
   private volatile boolean lastImageGood = false;