X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmol.java;h=09b0fdd6c24669f26f7ac74222f927b216e418ed;hb=30133ea9afab31009432eb013c299eb6c36ae75e;hp=4dfd18a0e08ccd158b6e28c79d9b260ef0c1ab41;hpb=cca50cb3aee94f3ed1a5e504d45b8d8b665f8c5b;p=jalview.git

diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index 4dfd18a..09b0fdd 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -1074,7 +1074,7 @@ public class AppJmol extends GStructureViewer implements Runnable,
       // Set the colour using the current view for the associated alignframe
       for (AlignmentPanel ap : _colourwith)
       {
-        jmb.colourBySequence(ap.av.showSequenceFeatures, ap);
+        jmb.colourBySequence(ap.av.isShowSequenceFeatures(), ap);
       }
     }
   }