X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmol.java;h=5f1a70bcc1dbe1e5582e96ab974d015cda624b38;hb=83f6c6309e9705037a0853a26da74821c9d4fd12;hp=7aa0183655d7a593c198d05d3a3c5b9eafddab34;hpb=c2632af10ee5c7c72dea1316cb42dabf1ea4a407;p=jalview.git

diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index 7aa0183..5f1a70b 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -33,6 +33,7 @@ import jalview.structure.*;
 import jalview.datamodel.PDBEntry;
 import jalview.io.*;
 import jalview.schemes.*;
+import jalview.ws.EBIFetchClient;
 
 import org.jmol.api.*;
 import org.jmol.adapter.smarter.SmarterJmolAdapter;
@@ -413,6 +414,7 @@ public synchronized void addSequence(SequenceI [] seq)
 
   public void seqColour_actionPerformed(ActionEvent actionEvent)
   {
+    lastCommand = null;
     colourBySequence = seqColour.isSelected();
     colourBySequence(ap.alignFrame.alignPanel);
   }
@@ -843,7 +845,8 @@ public synchronized void addSequence(SequenceI [] seq)
     if (chainId != null)
       picked+=(":"+chainId.substring(1, chainId.length()));
 
-    picked+=".C";
+    picked+=".CA";
+
 
     if (!atomsPicked.contains(picked))
     {