X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmol.java;h=afb727fe55fd1a96d2a062de569be678c4c56924;hb=0751c58086542f9e0466201b624f84d1efd547bb;hp=cbadbf9fc0ecf0abce3943174495de5decb676e7;hpb=76584a3ac3f6db6af4c3ace0d765827f83a3eb5b;p=jalview.git

diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index cbadbf9..afb727f 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -328,7 +328,7 @@ public class AppJmol extends StructureViewerBase
     for (String s : files)
     {
       fileList.append(SPACE).append(QUOTE)
-              .append(Platform.escapeString(s)).append(QUOTE);
+              .append(Platform.escapeBackslashes(s)).append(QUOTE);
     }
     String filesString = fileList.toString();
 
@@ -522,7 +522,7 @@ public class AppJmol extends StructureViewerBase
             addingStructures = true; // already files loaded.
             for (int c = 0; c < filesInViewer.length; c++)
             {
-              if (filesInViewer[c].equals(file))
+              if (Platform.pathEquals(filesInViewer[c], file))
               {
                 file = null;
                 break;
@@ -546,7 +546,7 @@ public class AppJmol extends StructureViewerBase
     }
     if (errormsgs.length() > 0)
     {
-      JvOptionPane.showInternalMessageDialog(Desktop.desktop,
+      JvOptionPane.showInternalMessageDialog(Desktop.getDesktopPane(),
               MessageManager.formatMessage(
                       "label.pdb_entries_couldnt_be_retrieved", new String[]
                       { errormsgs.toString() }),
@@ -586,8 +586,8 @@ public class AppJmol extends StructureViewerBase
   {
     try
     {
-      BrowserLauncher
-              .openURL("http://jmol.sourceforge.net/docs/JmolUserGuide/");
+      BrowserLauncher // BH 2018
+              .openURL("http://wiki.jmol.org");//http://jmol.sourceforge.net/docs/JmolUserGuide/");
     } catch (Exception ex)
     {
     }