X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmol.java;h=fef7451d7118664d2f2e6d4f82f4aca60c2320e9;hb=6d3ef91f739a955628e4d0b4338e93a36ea1eb28;hp=a4597d370c517c9b275dc8ef08f00f25e2dc94d4;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git

diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index a4597d3..fef7451 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -157,6 +157,11 @@ public class AppJmol extends StructureViewerBase
 
   IProgressIndicator progressBar = null;
 
+  @Override
+  protected IProgressIndicator getIProgressIndicator()
+  {
+    return progressBar;
+  }
   /**
    * add a single PDB structure to a new or existing Jmol view
    * 
@@ -248,7 +253,7 @@ public class AppJmol extends StructureViewerBase
   @Override
   protected List<StructureViewerBase> getViewersFor(AlignmentPanel apanel)
   {
-    List<StructureViewerBase> result = new ArrayList<StructureViewerBase>();
+    List<StructureViewerBase> result = new ArrayList<>();
     JInternalFrame[] frames = Desktop.instance.getAllFrames();
 
     for (JInternalFrame frame : frames)
@@ -300,7 +305,7 @@ public class AppJmol extends StructureViewerBase
   @Override
   void showSelectedChains()
   {
-    Vector<String> toshow = new Vector<String>();
+    Vector<String> toshow = new Vector<>();
     for (int i = 0; i < chainMenu.getItemCount(); i++)
     {
       if (chainMenu.getItem(i) instanceof JCheckBoxMenuItem)
@@ -489,7 +494,7 @@ public class AppJmol extends StructureViewerBase
     // todo - record which pdbids were successfully imported.
     StringBuilder errormsgs = new StringBuilder();
 
-    List<String> files = new ArrayList<String>();
+    List<String> files = new ArrayList<>();
     String pdbid = "";
     try
     {