X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppVarnaBinding.java;h=e5196cc9a8759f55e83d8b1562a59e6f2a7c8f1e;hb=ba1f9fee25b87bdac0c535019252b787939a8f80;hp=74308564ca8fd5cfaa97403e67f73133e3945d1d;hpb=41c7bc48046a03ae8247fa8f691f7fe68db8cce2;p=jalview.git diff --git a/src/jalview/gui/AppVarnaBinding.java b/src/jalview/gui/AppVarnaBinding.java index 7430856..e5196cc 100644 --- a/src/jalview/gui/AppVarnaBinding.java +++ b/src/jalview/gui/AppVarnaBinding.java @@ -289,8 +289,9 @@ public class AppVarnaBinding extends JalviewVarnaBinding name += " (Model " + mn++ + ")"; } _rnaList.add(varnaPanel.getConfig().clone(), r, name, - true); - // BH 2018 SwingJS clone of varnaPanel or its config will be the object itself, not a clone + true); + // BH 2018 SwingJS clone of varnaPanel or its config will + // be the object itself, not a clone } } } @@ -546,7 +547,8 @@ public class AppVarnaBinding extends JalviewVarnaBinding */ public void addStructure(RNA rna) { - VARNAConfig config = vp.getConfig().clone(); // BH 2018 this will NOT be a clone in SwingJS + VARNAConfig config = vp.getConfig().clone(); // BH 2018 this will NOT be a + // clone in SwingJS addStructure(rna, config); } @@ -572,7 +574,8 @@ public class AppVarnaBinding extends JalviewVarnaBinding } catch (ExceptionNAViewAlgorithm e) { // only throwable for draw mode = 3 NAView - System.err.println("Error drawing RNA: " + e.getMessage()); + jalview.bin.Console + .errPrintln("Error drawing RNA: " + e.getMessage()); } } }