X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppVarnaBinding.java;h=efc15463963100633520717c387e841754e5acb3;hb=ecb2c593fb296f6908deb65492835fac476b2378;hp=389efd1b88c85bbf145396613400286c3a8750bf;hpb=c42398f840e2a6709c5ccc45f84de2a12011c90a;p=jalview.git

diff --git a/src/jalview/gui/AppVarnaBinding.java b/src/jalview/gui/AppVarnaBinding.java
index 389efd1..efc1546 100644
--- a/src/jalview/gui/AppVarnaBinding.java
+++ b/src/jalview/gui/AppVarnaBinding.java
@@ -130,9 +130,9 @@ public class AppVarnaBinding extends JFrame implements DropTargetListener, Inter
 		initVarna(this.DEFAULT_SEQUENCE,this.DEFAULT_STRUCTURE1);
 	}
 	
-	public AppVarnaBinding(String seq){
+	public AppVarnaBinding(String seq, String struc){
 		super("VARNA in Jalview");
-		initVarna(seq,this.DEFAULT_STRUCTURE1);
+		initVarna(seq,struc);
 	}
 	
 	
@@ -140,13 +140,11 @@ public class AppVarnaBinding extends JFrame implements DropTargetListener, Inter
 	private void initVarna(String seq, String str){
 		DefaultListModel dlm = new DefaultListModel(); 
 	    
-
 		DefaultListSelectionModel m = new DefaultListSelectionModel();
 	    m.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);
 	    m.setLeadAnchorNotificationEnabled(false);
 	    
-	    
-		_sideList = new ReorderableJList();
+	    _sideList = new ReorderableJList();
 		_sideList.setModel(dlm);
 		_sideList.addMouseListener(this);
 	    _sideList.setSelectionModel(m);