X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAssociatePdbFileWithSeq.java;h=01f1cb0f960c4ebbba0249e96c5704d743ac8e4e;hb=d5e858c7a3a5cc821651a94433f35003921c9edd;hp=bf0957e321328d0b0286ddb1feffbe74e3a31714;hpb=21c29b20790ac555b2e2a124a034f6c6b4486270;p=jalview.git diff --git a/src/jalview/gui/AssociatePdbFileWithSeq.java b/src/jalview/gui/AssociatePdbFileWithSeq.java index bf0957e..01f1cb0 100644 --- a/src/jalview/gui/AssociatePdbFileWithSeq.java +++ b/src/jalview/gui/AssociatePdbFileWithSeq.java @@ -1,24 +1,26 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) - * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) + * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.gui; import javax.swing.JOptionPane; - import jalview.datamodel.PDBEntry; import jalview.datamodel.SequenceI; import jalview.util.MessageManager; @@ -52,11 +54,11 @@ public class AssociatePdbFileWithSeq if (prompt) { - reply = JOptionPane - .showInternalInputDialog( - Desktop.desktop, - MessageManager.getString("label.couldnt_find_pdb_id_in_file"), - MessageManager.getString("label.no_pdb_id_in_file"), JOptionPane.QUESTION_MESSAGE); + reply = JOptionPane.showInternalInputDialog(Desktop.desktop, + MessageManager + .getString("label.couldnt_find_pdb_id_in_file"), + MessageManager.getString("label.no_pdb_id_in_file"), + JOptionPane.QUESTION_MESSAGE); } if (reply == null) { @@ -69,6 +71,7 @@ public class AssociatePdbFileWithSeq { entry.setId(pdbfile.id); } + } catch (java.io.IOException ex) { ex.printStackTrace(); @@ -78,5 +81,4 @@ public class AssociatePdbFileWithSeq sequence.getDatasetSequence().addPDBId(entry); return entry; } - }