X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAssociatePdbFileWithSeq.java;h=e2637a95cf603d9eccf2e0377beb1bc6d36fa31e;hb=c775190fba1fe7430b060d48d5d8cc13902a8f47;hp=1247ace9732076bfc5e80b5f33ebc811ce4c79fd;hpb=6d7ab37f37b09174ec61fee301aed6057ef86605;p=jalview.git diff --git a/src/jalview/gui/AssociatePdbFileWithSeq.java b/src/jalview/gui/AssociatePdbFileWithSeq.java index 1247ace..e2637a9 100644 --- a/src/jalview/gui/AssociatePdbFileWithSeq.java +++ b/src/jalview/gui/AssociatePdbFileWithSeq.java @@ -23,6 +23,7 @@ package jalview.gui; import jalview.api.StructureSelectionManagerProvider; import jalview.datamodel.PDBEntry; import jalview.datamodel.SequenceI; +import jalview.io.StructureFile; import jalview.structure.StructureSelectionManager; import jalview.util.MessageManager; @@ -48,7 +49,7 @@ public class AssociatePdbFileWithSeq StructureSelectionManagerProvider ssmp) { PDBEntry entry = new PDBEntry(); - MCview.PDBfile pdbfile = null; + StructureFile pdbfile = null; pdbfile = StructureSelectionManager.getStructureSelectionManager(ssmp) .setMapping(false, new SequenceI[] { sequence }, null, choice, protocol);