X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FCalculationChooser.java;h=336a3127077e92d37e7f130e66db15f3d82a0807;hb=e1aa3fdd1ca82abf5acc0cd3c2b86a5ca1083941;hp=f0d9521a9cdc1dca6b8198105c5dd2d087f0f2c1;hpb=82de3ff949ae61b771136fbdb49baacc20e652fd;p=jalview.git

diff --git a/src/jalview/gui/CalculationChooser.java b/src/jalview/gui/CalculationChooser.java
index f0d9521..336a312 100644
--- a/src/jalview/gui/CalculationChooser.java
+++ b/src/jalview/gui/CalculationChooser.java
@@ -271,9 +271,9 @@ public class CalculationChooser extends JPanel
 
     setMinimumSize(new Dimension(325, height - 10));
     String title = MessageManager.getString("label.choose_calculation");
-    if (af.getViewport().viewName != null)
+    if (af.getViewport().getViewName() != null)
     {
-      title = title + " (" + af.getViewport().viewName + ")";
+      title = title + " (" + af.getViewport().getViewName() + ")";
     }
 
     Desktop.addInternalFrame(frame, title, width, height, false);
@@ -584,7 +584,13 @@ public class CalculationChooser extends JPanel
               JvOptionPane.WARNING_MESSAGE);
       return;
     }
+
+    /*
+     * construct the panel and kick off its calculation thread
+     */
     pcaPanel = new PCAPanel(af.alignPanel, modelName, params);
+    new Thread(pcaPanel).start();
+
   }
 
   /**