X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FCutAndPasteTransfer.java;h=175a609d7833ccd57575020950d941b749e6e6a4;hb=588042b69abf8e60bcc950b24c283933c7dd422f;hp=262fc41d14992dea85e2a885c59b26d37e0a6b33;hpb=5cd8e373c75fb348ecda4d94d8a46468fb92756d;p=jalview.git

diff --git a/src/jalview/gui/CutAndPasteTransfer.java b/src/jalview/gui/CutAndPasteTransfer.java
index 262fc41..175a609 100755
--- a/src/jalview/gui/CutAndPasteTransfer.java
+++ b/src/jalview/gui/CutAndPasteTransfer.java
@@ -1,115 +1,130 @@
-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
-*/
-
-package jalview.gui;
-
-import jalview.jbgui.GCutAndPasteTransfer;
-import java.awt.*;
-import java.awt.event.ActionEvent;
-import java.awt.datatransfer.*;
-import jalview.datamodel.Alignment;
-import jalview.io.FormatAdapter;
-import jalview.datamodel.SequenceI;
-import javax.swing.JOptionPane;
-import jalview.io.IdentifyFile;
-
-public class CutAndPasteTransfer extends GCutAndPasteTransfer
-{
-  public void setForInput()
-  {
-    getContentPane().add(inputButtonPanel, java.awt.BorderLayout.SOUTH);
-  }
-
-  public String getText()
-  {
-    return textarea.getText();
-  }
-
-  public void setText(String text)
-  {
-    textarea.setText(text);
-  }
-
-  public void copyItem_actionPerformed(ActionEvent e)
-  {
-    Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();
-    c.setContents( new StringSelection( textarea.getText()) , null ) ;
-  }
-
-  public void pasteMenu_actionPerformed(ActionEvent e)
-  {
-    Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();
-    Transferable contents = c.getContents(this);
-    if (contents == null)
-      return;
-    try{
-      textarea.setText( (String) contents.getTransferData(DataFlavor.
-          stringFlavor));
-    }catch(Exception ex){}
-  }
-
-  public void ok_actionPerformed(ActionEvent e)
-  {
-      String format = IdentifyFile.Identify(getText(), "Paste");
-      SequenceI [] sequences = null;
-
-      if (FormatAdapter.formats.contains( format ))
-        sequences = FormatAdapter.readFile(getText(), "Paste", format);
-
-
-        if(sequences!=null)
-        {
-          AlignFrame af = new AlignFrame(new Alignment(sequences));
-          af.currentFileFormat = format;
-          Desktop.addInternalFrame(af, "Cut & Paste input - " + format,
-                                   AlignFrame.NEW_WINDOW_WIDTH,
-                                   AlignFrame.NEW_WINDOW_HEIGHT);
-          af.statusBar.setText("Successfully pasted alignment file");
-          try
-          {  af.setMaximum(Preferences.showFullscreen);    }
-          catch (Exception ex)
-          {}
-          try
-          {
-            this.setClosed(true);
-          }
-          catch (Exception ex)
-          {}
-
-
-        }
-        else
-          JOptionPane.showInternalMessageDialog(Desktop.desktop,
-                                                "Couldn't read the pasted text.\n"
-                                                + "Formats currently supported are\n"
-                                                +
-              "Fasta, MSF, Clustal, BLC, PIR, MSP, and PFAM",
-                                                "Error parsing text",
-                                                JOptionPane.WARNING_MESSAGE);
-  }
-
-  public void cancel_actionPerformed(ActionEvent e)
-  {
-    try{
-      this.setClosed(true);
-    }catch(Exception ex){}
-  }
-
-
-}
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer
+ * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+ */
+package jalview.gui;
+
+import java.awt.*;
+import java.awt.datatransfer.*;
+import java.awt.event.*;
+import javax.swing.*;
+
+import jalview.datamodel.*;
+import jalview.io.*;
+import jalview.jbgui.*;
+
+public class CutAndPasteTransfer
+    extends GCutAndPasteTransfer
+{
+  public void setForInput()
+  {
+    getContentPane().add(inputButtonPanel, java.awt.BorderLayout.SOUTH);
+  }
+
+  public String getText()
+  {
+    return textarea.getText();
+  }
+
+  public void setText(String text)
+  {
+    textarea.setText(text);
+  }
+
+  public void copyItem_actionPerformed(ActionEvent e)
+  {
+    Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();
+    c.setContents(new StringSelection(textarea.getText()), null);
+  }
+
+  public void pasteMenu_actionPerformed(ActionEvent e)
+  {
+    Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();
+    Transferable contents = c.getContents(this);
+
+    if (contents == null)
+    {
+      return;
+    }
+
+    try
+    {
+      textarea.setText( (String) contents.getTransferData(
+          DataFlavor.stringFlavor));
+    }
+    catch (Exception ex)
+    {
+    }
+  }
+
+  public void ok_actionPerformed(ActionEvent e)
+  {
+    String format = IdentifyFile.Identify(getText(), "Paste");
+    SequenceI[] sequences = null;
+
+    if (FormatAdapter.formats.contains(format))
+    {
+      sequences = FormatAdapter.readFile(getText(), "Paste", format);
+    }
+
+    if (sequences != null)
+    {
+      AlignFrame af = new AlignFrame(new Alignment(sequences));
+      af.currentFileFormat = format;
+      Desktop.addInternalFrame(af, "Cut & Paste input - " + format,
+                               AlignFrame.NEW_WINDOW_WIDTH,
+                               AlignFrame.NEW_WINDOW_HEIGHT);
+      af.statusBar.setText("Successfully pasted alignment file");
+
+      try
+      {
+        af.setMaximum(Preferences.showFullscreen);
+      }
+      catch (Exception ex)
+      {
+      }
+
+      try
+      {
+        this.setClosed(true);
+      }
+      catch (Exception ex)
+      {
+      }
+    }
+    else
+    {
+      JOptionPane.showInternalMessageDialog(Desktop.desktop,
+                                            "Couldn't read the pasted text.\n" +
+                                            "Formats currently supported are\n" +
+                                            "Fasta, MSF, Clustal, BLC, PIR, MSP, and PFAM",
+                                            "Error parsing text",
+                                            JOptionPane.WARNING_MESSAGE);
+    }
+  }
+
+  public void cancel_actionPerformed(ActionEvent e)
+  {
+    try
+    {
+      this.setClosed(true);
+    }
+    catch (Exception ex)
+    {
+    }
+  }
+}