X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FDasSourceBrowser.java;h=f781473d4395551bf94fa8a0a243e826f79121e3;hb=aa91e8c4561c2dd0f18760e18fb0052979733bf8;hp=329990e2d0ffb5303aff7d3871bee2af3241ada2;hpb=47168f025aefdaa044802bd5f8f510ffe43a4808;p=jalview.git diff --git a/src/jalview/gui/DasSourceBrowser.java b/src/jalview/gui/DasSourceBrowser.java index 329990e..f781473 100644 --- a/src/jalview/gui/DasSourceBrowser.java +++ b/src/jalview/gui/DasSourceBrowser.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -20,6 +20,7 @@ */ package jalview.gui; +import jalview.bin.Cache; import jalview.jbgui.GDasSourceBrowser; import jalview.util.MessageManager; import jalview.util.TableSorter; @@ -63,7 +64,7 @@ public class DasSourceBrowser extends GDasSourceBrowser implements { fs = featureSettings; // TODO DasSourceRegistryProvider API - sourceRegistry = jalview.bin.Cache.getDasSourceRegistry(); + sourceRegistry = Cache.getDasSourceRegistry(); String registry = sourceRegistry.getDasRegistryURL(); registryURL.setText(registry); @@ -174,7 +175,9 @@ public class DasSourceBrowser extends GDasSourceBrowser implements if (nickName == null) { - fullDetails.setText(text + MessageManager.getString("label.select_das_service_from_table")); + fullDetails.setText(text + + MessageManager + .getString("label.select_das_service_from_table")); return; } @@ -358,7 +361,7 @@ public class DasSourceBrowser extends GDasSourceBrowser implements public void refresh_actionPerformed(ActionEvent e) { - saveProperties(jalview.bin.Cache.applicationProperties); + saveProperties(Cache.applicationProperties); Thread worker = new Thread(this); worker.start(); @@ -433,21 +436,25 @@ public class DasSourceBrowser extends GDasSourceBrowser implements JTextField nametf = new JTextField(nickname, 40); JTextField urltf = new JTextField(url, 40); - JCheckBox seqs = new JCheckBox(MessageManager.getString("label.sequence_source")); + JCheckBox seqs = new JCheckBox( + MessageManager.getString("label.sequence_source")); seqs.setSelected(seqsrc); JPanel panel = new JPanel(new BorderLayout()); JPanel pane12 = new JPanel(new BorderLayout()); - pane12.add(new JLabel(MessageManager.getString("label.structure_manager")), BorderLayout.CENTER); + pane12.add(new JLabel(MessageManager.getString("label.name")), + BorderLayout.CENTER); pane12.add(nametf, BorderLayout.EAST); panel.add(pane12, BorderLayout.NORTH); pane12 = new JPanel(new BorderLayout()); - pane12.add(new JLabel(MessageManager.getString("label.url")), BorderLayout.NORTH); + pane12.add(new JLabel(MessageManager.getString("label.url")), + BorderLayout.NORTH); pane12.add(seqs, BorderLayout.SOUTH); pane12.add(urltf, BorderLayout.EAST); panel.add(pane12, BorderLayout.SOUTH); int reply = JOptionPane.showInternalConfirmDialog(Desktop.desktop, - panel, MessageManager.getString("label.enter_local_das_source"), + panel, + MessageManager.getString("label.enter_local_das_source"), JOptionPane.OK_CANCEL_OPTION); if (reply != JOptionPane.OK_OPTION) @@ -519,10 +526,13 @@ public class DasSourceBrowser extends GDasSourceBrowser implements if (!sourceRegistry.getSource(nickname).isLocal()) { - JOptionPane.showInternalMessageDialog(Desktop.desktop, - MessageManager.getString("label.you_can_only_edit_or_remove_local_das_sources"), - MessageManager.getString("label.public_das_source"), - JOptionPane.WARNING_MESSAGE); + JOptionPane + .showInternalMessageDialog( + Desktop.desktop, + MessageManager + .getString("label.you_can_only_edit_or_remove_local_das_sources"), + MessageManager.getString("label.public_das_source"), + JOptionPane.WARNING_MESSAGE); return; } @@ -674,7 +684,7 @@ public class DasSourceBrowser extends GDasSourceBrowser implements void setSelectedFromProperties() { - String active = jalview.bin.Cache.getDefault("DAS_ACTIVE_SOURCE", + String active = Cache.getDefault("DAS_ACTIVE_SOURCE", "uniprot"); StringTokenizer st = new StringTokenizer(active, "\t"); selectedSources = new Vector(); @@ -698,11 +708,11 @@ public class DasSourceBrowser extends GDasSourceBrowser implements { if (registryURL.getText() == null || registryURL.getText().length() < 1) { - properties.remove(jalview.bin.Cache.DAS_REGISTRY_URL); + properties.remove(Cache.DAS_REGISTRY_URL); } else { - properties.setProperty(jalview.bin.Cache.DAS_REGISTRY_URL, + properties.setProperty(Cache.DAS_REGISTRY_URL, registryURL.getText()); } @@ -715,11 +725,11 @@ public class DasSourceBrowser extends GDasSourceBrowser implements } } - properties.setProperty(jalview.bin.Cache.DAS_ACTIVE_SOURCE, + properties.setProperty(Cache.DAS_ACTIVE_SOURCE, sb.toString()); String sourceprop = sourceRegistry.getLocalSourceString(); - properties.setProperty(jalview.bin.Cache.DAS_LOCAL_SOURCE, sourceprop); + properties.setProperty(Cache.DAS_LOCAL_SOURCE, sourceprop); } class DASTableModel extends AbstractTableModel @@ -731,7 +741,7 @@ public class DasSourceBrowser extends GDasSourceBrowser implements } private String[] columnNames = new String[] - { "Nickname", "Use Source" }; + { MessageManager.getString("label.nickname"), MessageManager.getString("label.use_source") }; private Object[][] data;