X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FDesktop.java;fp=src%2Fjalview%2Fgui%2FDesktop.java;h=393818b595dc24b58e72e6e37af18a942c885629;hb=cb678533f3bbdce41510b5f2bc0c5291f920e664;hp=4beacd9d7d3d6f4a237a831805f704af705bd50e;hpb=4618ad78a2bb127995d1eb92fd2286d24ec3c87a;p=jalview.git

diff --git a/src/jalview/gui/Desktop.java b/src/jalview/gui/Desktop.java
index 4beacd9..393818b 100644
--- a/src/jalview/gui/Desktop.java
+++ b/src/jalview/gui/Desktop.java
@@ -2979,12 +2979,14 @@ public class Desktop extends jalview.jbgui.GDesktop implements
        * cdna/protein relationships between the viewports is carried over to the
        * new split frames.
        */
-      AlignmentViewPanel topPanel = topPanels.get(i);
-      AlignFrame newTopFrame = new AlignFrame((AlignmentPanel) topPanel);
+      AlignmentPanel topPanel = (AlignmentPanel) topPanels.get(i);
+      AlignFrame newTopFrame = new AlignFrame(topPanel);
       newTopFrame.setVisible(true);
       AlignmentPanel bottomPanel = (AlignmentPanel) bottomPanels.get(i);
       AlignFrame newBottomFrame = new AlignFrame(bottomPanel);
       newBottomFrame.setVisible(true);
+      topPanel.av.setGatherViewsHere(false);
+      bottomPanel.av.setGatherViewsHere(false);
       JInternalFrame splitFrame = new SplitFrame(newTopFrame,
               newBottomFrame);
       // either panel may hold previous exploded frame geometry
@@ -2995,9 +2997,6 @@ public class Desktop extends jalview.jbgui.GDesktop implements
         splitFrame.setBounds(geometry);
       }
       Desktop.addInternalFrame(splitFrame, sf.getTitle(), -1, -1);
-
-      //
-      // ap.av.gatherViewsHere = false;
     }
 
     /*