X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FDesktop.java;h=ad80ca54fa6b4425be811f5b55a3758eea81d84c;hb=8f5e471f79fdd55b7dc397f942232cb036c14017;hp=bf729f6bfef828942b114f2ed1122a8ad5a9443a;hpb=d8c804e4bd05fe0c6cfc3e8ebbfe1815fade5e54;p=jalview.git

diff --git a/src/jalview/gui/Desktop.java b/src/jalview/gui/Desktop.java
index bf729f6..ad80ca5 100644
--- a/src/jalview/gui/Desktop.java
+++ b/src/jalview/gui/Desktop.java
@@ -68,8 +68,6 @@ import java.awt.dnd.DropTargetEvent;
 import java.awt.dnd.DropTargetListener;
 import java.awt.event.ActionEvent;
 import java.awt.event.ActionListener;
-import java.awt.event.FocusEvent;
-import java.awt.event.FocusListener;
 import java.awt.event.KeyEvent;
 import java.awt.event.MouseAdapter;
 import java.awt.event.MouseEvent;
@@ -346,10 +344,6 @@ public class Desktop extends jalview.jbgui.GDesktop
     boolean showjconsole = jalview.bin.Cache.getDefault("SHOW_JAVA_CONSOLE",
             false);
     desktop = new MyDesktopPane(selmemusage);
-    if (Platform.isAMac())
-    {
-      desktop.setDoubleBuffered(false);
-    }
     showMemusage.setSelected(selmemusage);
     desktop.setBackground(Color.white);
     getContentPane().setLayout(new BorderLayout());
@@ -363,7 +357,11 @@ public class Desktop extends jalview.jbgui.GDesktop
     // This line prevents Windows Look&Feel resizing all new windows to maximum
     // if previous window was maximised
     desktop.setDesktopManager(
-            new MyDesktopManager(new DefaultDesktopManager()));
+            new MyDesktopManager(
+                    (Platform.isWindows() ? new DefaultDesktopManager()
+                            : Platform.isAMac()
+                                    ? new AquaInternalFrameManager()
+                                    : desktop.getDesktopManager())));
 
     Rectangle dims = getLastKnownDimensions("");
     if (dims != null)
@@ -433,24 +431,6 @@ public class Desktop extends jalview.jbgui.GDesktop
     });
     desktop.addMouseListener(ma);
 
-    this.addFocusListener(new FocusListener()
-    {
-
-      @Override
-      public void focusLost(FocusEvent e)
-      {
-        // TODO Auto-generated method stub
-
-      }
-
-      @Override
-      public void focusGained(FocusEvent e)
-      {
-        Cache.log.debug("Relaying windows after focus gain");
-        // make sure that we sort windows properly after we gain focus
-        instance.relayerWindows();
-      }
-    });
     this.setDropTarget(new java.awt.dnd.DropTarget(desktop, this));
     // Spawn a thread that shows the splashscreen
     SwingUtilities.invokeLater(new Runnable()
@@ -868,13 +848,7 @@ public class Desktop extends jalview.jbgui.GDesktop
     frame.setResizable(resizable);
     frame.setMaximizable(resizable);
     frame.setIconifiable(resizable);
-    if (Platform.isAMac())
-    {
-      frame.setIconifiable(false);
-      frame.setFrameIcon(null);
-      // frame.setDesktopIcon(null);
-      frame.setDoubleBuffered(false);
-    }
+
     if (frame.getX() < 1 && frame.getY() < 1)
     {
       frame.setLocation(xOffset * openFrameCount,
@@ -1013,8 +987,8 @@ public class Desktop extends jalview.jbgui.GDesktop
     // Java's Transferable for native dnd
     evt.acceptDrop(DnDConstants.ACTION_COPY_OR_MOVE);
     Transferable t = evt.getTransferable();
-    List<String> files = new ArrayList<String>();
-    List<DataSourceType> protocols = new ArrayList<DataSourceType>();
+    List<String> files = new ArrayList<>();
+    List<DataSourceType> protocols = new ArrayList<>();
 
     try
     {
@@ -1722,7 +1696,7 @@ public class Desktop extends jalview.jbgui.GDesktop
 
   JPanel progressPanel;
 
-  ArrayList<JPanel> fileLoadingPanels = new ArrayList<JPanel>();
+  ArrayList<JPanel> fileLoadingPanels = new ArrayList<>();
 
   public void startLoading(final String fileName)
   {
@@ -1814,7 +1788,7 @@ public class Desktop extends jalview.jbgui.GDesktop
       // TODO: verify that frames are recoverable when in headless mode
       return null;
     }
-    List<AlignmentPanel> aps = new ArrayList<AlignmentPanel>();
+    List<AlignmentPanel> aps = new ArrayList<>();
     AlignFrame[] frames = getAlignFrames();
     if (frames == null)
     {
@@ -1849,7 +1823,7 @@ public class Desktop extends jalview.jbgui.GDesktop
    */
   public static AlignmentViewport[] getViewports(String sequenceSetId)
   {
-    List<AlignmentViewport> viewp = new ArrayList<AlignmentViewport>();
+    List<AlignmentViewport> viewp = new ArrayList<>();
     if (desktop != null)
     {
       AlignFrame[] frames = Desktop.getAlignFrames();
@@ -2362,7 +2336,7 @@ public class Desktop extends jalview.jbgui.GDesktop
           // SEQUENCE_ID which is not the default EMBL_EBI link
           ListIterator<String> li = links.listIterator();
           boolean check = false;
-          List<JLabel> urls = new ArrayList<JLabel>();
+          List<JLabel> urls = new ArrayList<>();
           while (li.hasNext())
           {
             String link = li.next();
@@ -2456,6 +2430,7 @@ public class Desktop extends jalview.jbgui.GDesktop
         Thread worker = new Thread(this);
         worker.start();
       }
+      repaint();
     }
 
     public boolean isShowMemoryUsage()
@@ -2519,14 +2494,6 @@ public class Desktop extends jalview.jbgui.GDesktop
     }
   }
 
-  /**
-   * fixes stacking order after a modal dialog to ensure windows that should be
-   * on top actually are
-   */
-  public void relayerWindows()
-  {
-
-  }
 
   /**
    * Accessor method to quickly get all the AlignmentFrames loaded.
@@ -2547,7 +2514,7 @@ public class Desktop extends jalview.jbgui.GDesktop
     {
       return null;
     }
-    List<AlignFrame> avp = new ArrayList<AlignFrame>();
+    List<AlignFrame> avp = new ArrayList<>();
     // REVERSE ORDER
     for (int i = frames.length - 1; i > -1; i--)
     {
@@ -2592,7 +2559,7 @@ public class Desktop extends jalview.jbgui.GDesktop
     {
       return null;
     }
-    List<GStructureViewer> avp = new ArrayList<GStructureViewer>();
+    List<GStructureViewer> avp = new ArrayList<>();
     // REVERSE ORDER
     for (int i = frames.length - 1; i > -1; i--)
     {
@@ -2735,8 +2702,8 @@ public class Desktop extends jalview.jbgui.GDesktop
   {
     if (progressBars == null)
     {
-      progressBars = new Hashtable<Long, JPanel>();
-      progressBarHandlers = new Hashtable<Long, IProgressIndicatorHandler>();
+      progressBars = new Hashtable<>();
+      progressBarHandlers = new Hashtable<>();
     }
 
     if (progressBars.get(new Long(id)) != null)