X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FFeatureSettings.java;h=a3a23964579116ad01f4bb1881014106f729d703;hb=dd74fc4938723fe5ec48d4e5fdcfbe58ac42a48d;hp=24058089d7f1b16c5255f90b2a77d1c059d9816f;hpb=38a10817438b42f7cba2ee95d4d65cb9672926ab;p=jalview.git

diff --git a/src/jalview/gui/FeatureSettings.java b/src/jalview/gui/FeatureSettings.java
index 2405808..a3a2396 100755
--- a/src/jalview/gui/FeatureSettings.java
+++ b/src/jalview/gui/FeatureSettings.java
@@ -294,6 +294,13 @@ public class FeatureSettings extends JPanel
       data[dataIndex][0] = type;
 
       data[dataIndex][1] = fr.getColour(type);
+      if (data[dataIndex][1] == null)
+      {
+        //"Colour has been updated in another view!!"
+        fr.renderOrder = null;
+        return;
+      }
+
       data[dataIndex][2] = new Boolean(true);
       dataIndex++;
     }
@@ -572,9 +579,9 @@ public class FeatureSettings extends JPanel
     int iSize;
 
     if(af.getViewport().getSelectionGroup()!=null
-      && af.getViewport().getSelectionGroup().getSize(false)>0)
+      && af.getViewport().getSelectionGroup().getSize()>0)
     {
-      iSize = af.getViewport().getSelectionGroup().getSize(false);
+      iSize = af.getViewport().getSelectionGroup().getSize();
       dataset = new SequenceI[iSize];
       seqs = af.getViewport().getSelectionGroup().
           getSequencesInOrder(