X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FFinder.java;h=869755280b39292b96b631e045839322191e7cd1;hb=012fc200ee0d124003524855ac7cd50be4b7456c;hp=e8c16d234f398bce693cd176b1601c56abf6a501;hpb=174230b4233d9ce80f94527768d2cd2f76da11ab;p=jalview.git

diff --git a/src/jalview/gui/Finder.java b/src/jalview/gui/Finder.java
index e8c16d2..8697552 100755
--- a/src/jalview/gui/Finder.java
+++ b/src/jalview/gui/Finder.java
@@ -114,34 +114,29 @@ public class Finder extends GFinder
         panel.add(label, BorderLayout.NORTH);
         panel.add(textinput, BorderLayout.SOUTH);
 
-         int reply = JOptionPane.showInternalConfirmDialog(Desktop.desktop,
-            panel, "New Sequence Feature Name",
-          JOptionPane.OK_CANCEL_OPTION );
 
-         if(reply != JOptionPane.OK_OPTION)
-           return;
+        SequenceI [] seqs = new SequenceI[searchResults.getSize()];
+        SequenceFeature [] features = new SequenceFeature[searchResults.getSize()];
+
 
         for (int i = 0; i < searchResults.getSize(); i ++ )
         {
-            SequenceI seq = searchResults.getResultSequence(i);
+            seqs[i] = searchResults.getResultSequence(i).getDatasetSequence();
 
-            SequenceFeature sf = new SequenceFeature(textinput.getText(),
+            features[i] = new SequenceFeature(textinput.getText(),
                 "Search Results", null,
                 searchResults.getResultStart(i),
-               searchResults.getResultEnd(i),
+                searchResults.getResultEnd(i),
                "Search Results");
-
-            ap.seqPanel.seqCanvas.getFeatureRenderer().addNewFeature(
-                textinput.getText(), new Color(60,160,115),
-                    "Search Results");
-
-            seq.getDatasetSequence().addSequenceFeature(sf);
         }
 
-        ap.seqPanel.seqCanvas.getFeatureRenderer().findAllFeatures();
-        ap.alignFrame.showSeqFeatures.setSelected(true);
-        av.setShowSequenceFeatures(true);
-        ap.highlightSearchResults(null);
+        if( ap.seqPanel.seqCanvas.getFeatureRenderer()
+            .createNewFeatures(seqs, features))
+        {
+          ap.alignFrame.showSeqFeatures.setSelected(true);
+          av.setShowSequenceFeatures(true);
+          ap.highlightSearchResults(null);
+        }
     }
 
     /**