X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FFontChooser.java;h=80ac189eaf1f0c4263b427e11223feea1b8ea5bf;hb=a57976ba40e1abe6d7c1940386e1a25419ef9c9d;hp=5271e4f73667d6b8080078879f763481cf6f2f7d;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git

diff --git a/src/jalview/gui/FontChooser.java b/src/jalview/gui/FontChooser.java
index 5271e4f..80ac189 100755
--- a/src/jalview/gui/FontChooser.java
+++ b/src/jalview/gui/FontChooser.java
@@ -183,7 +183,7 @@ public class FontChooser extends GFontChooser
   {
     ap.av.antiAlias = smoothFont.isSelected();
     ap.getAnnotationPanel().image = null;
-    ap.paintAlignment(true);
+    ap.paintAlignment(true, false);
     if (ap.av.getCodingComplement() != null && ap.av.isProteinFontAsCdna())
     {
       ((AlignViewport) ap.av
@@ -235,7 +235,7 @@ public class FontChooser extends GFontChooser
       ap.av.setScaleProteinAsCdna(oldProteinScale);
       ap.av.setProteinFontAsCdna(oldMirrorFont);
       ap.av.antiAlias = oldSmoothFont;
-      ap.paintAlignment(true);
+      ap.paintAlignment(true, false);
 
       if (scaleAsCdna.isVisible() && scaleAsCdna.isEnabled())
       {
@@ -327,22 +327,17 @@ public class FontChooser extends GFontChooser
       ap.fontChanged();
 
       /*
-       * adjust other half of split frame if any, if either same
-       * font, or proportionate scaling, is selected
+       * adjust other half of split frame if present, whether or not same font or
+       * scale to cDNA is selected, because a font change may affect character
+       * width, and this is kept the same in both panels
        */
-      if (fontAsCdna.isEnabled())
+      if (fontAsCdna.isVisible())
       {
         if (fontAsCdna.isSelected())
         {
-          /*
-           * copy the font
-           */
           ap.av.getCodingComplement().setFont(newFont, true);
         }
 
-        /*
-         * adjust layout for font change / reset / sizing
-         */
         SplitFrame splitFrame = (SplitFrame) ap.alignFrame
                 .getSplitViewContainer();
         splitFrame.adjustLayout();