X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FGroupEditor.java;h=e3c49d6208dfe263d1650eb079e9749c5b320c25;hb=577f505f54fe343e89f581461e780ea8308c20ec;hp=3ee186b1151488b8ad05eb6ebbef37a75c7f4cee;hpb=ad69965c1fc78b90245919ad711682e5dc333dc1;p=jalview.git

diff --git a/src/jalview/gui/GroupEditor.java b/src/jalview/gui/GroupEditor.java
index 3ee186b..e3c49d6 100755
--- a/src/jalview/gui/GroupEditor.java
+++ b/src/jalview/gui/GroupEditor.java
@@ -198,10 +198,10 @@ public class GroupEditor extends GGroupEditor
       return;
 
     SequenceGroup sg = (SequenceGroup)groups.elementAt(selectedGroupIndex);
-    Selection sel = av.getSelection();
-    for(int i=0; i<sel.size(); i++)
+
+    for(int i=0; i<av.getSelectionGroup().getSize(); i++)
     {
-      int index = unassignedVector.indexOf( sel.sequenceAt(i).getDisplayId() );
+      int index = unassignedVector.indexOf( av.getSelectionGroup().getSequenceAt(i).getDisplayId() );
       if(index!=-1)
       {
         sg.addSequence( (SequenceI) sequenceHash.get( unassignedVector.elementAt(index) ));
@@ -267,7 +267,7 @@ public class GroupEditor extends GGroupEditor
 
       unassignedVector.addElement(assignedVector.elementAt(indices[i]-i));
       SequenceI removeSequence = (SequenceI)sequenceHash.get( assignedVector.elementAt(indices[i]-i) );
-      av.getSelection().removeElement( removeSequence );
+      av.getSelectionGroup().deleteSequence( removeSequence );
       sg.deleteSequence( removeSequence );
       assignedVector.removeElementAt(indices[i]-i);
 
@@ -288,7 +288,7 @@ public class GroupEditor extends GGroupEditor
       String id = (String)enum.nextElement();
       unassignedVector.addElement( id );
       SequenceI removeSequence = (SequenceI)sequenceHash.get( id );
-      av.getSelection().removeElement( removeSequence );
+      av.getSelectionGroup().deleteSequence( removeSequence );
       sg.deleteSequence( removeSequence );
     }