X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FIdPanel.java;h=d425354380c2cfaad538673211eff1efb794353f;hb=f6bde21f2fba3f12afedd6486bc8326a63f1373f;hp=4ea35caac9c99ed337c954bbdc3fd8e947fe12b2;hpb=be32c14cd8e48fe0a207cd7030cb9cd46f894678;p=jalview.git diff --git a/src/jalview/gui/IdPanel.java b/src/jalview/gui/IdPanel.java index 4ea35ca..d425354 100755 --- a/src/jalview/gui/IdPanel.java +++ b/src/jalview/gui/IdPanel.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) - * Copyright (C) $$Year-Rel$$ The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * @@ -27,6 +27,7 @@ import jalview.datamodel.SequenceI; import jalview.io.SequenceAnnotationReport; import jalview.util.MessageManager; import jalview.util.UrlLink; +import jalview.viewmodel.AlignmentViewport; import java.awt.BorderLayout; import java.awt.event.MouseEvent; @@ -54,7 +55,7 @@ public class IdPanel extends JPanel implements MouseListener, { private IdCanvas idCanvas; - protected AlignViewport av; + protected AlignmentViewport av; protected AlignmentPanel alignPanel; @@ -108,10 +109,9 @@ public class IdPanel extends JPanel implements MouseListener, { SequenceI sequence = av.getAlignment().getSequenceAt(seq); StringBuffer tip = new StringBuffer(64); - seqAnnotReport - .createSequenceAnnotationReport(tip, sequence, + seqAnnotReport.createSequenceAnnotationReport(tip, sequence, av.isShowDBRefs(), av.isShowNPFeats(), - sp.seqCanvas.fr.getMinMax()); + sp.seqCanvas.fr.getMinMax()); setToolTipText("" + sequence.getDisplayId(true) + " " + tip.toString() + ""); } @@ -244,11 +244,10 @@ public class IdPanel extends JPanel implements MouseListener, jalview.util.BrowserLauncher.openURL(url); } catch (Exception ex) { - JOptionPane - .showInternalMessageDialog( - Desktop.desktop, - MessageManager.getString("label.web_browser_not_found_unix"), - MessageManager.getString("label.web_browser_not_found"), JOptionPane.WARNING_MESSAGE); + JOptionPane.showInternalMessageDialog(Desktop.desktop, + MessageManager.getString("label.web_browser_not_found_unix"), + MessageManager.getString("label.web_browser_not_found"), + JOptionPane.WARNING_MESSAGE); ex.printStackTrace(); } }