X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalview2XML.java;h=473d8abaa632393051c51a7eb8d0086ee158f9d7;hb=e838644df5d5a10a16cf0ad7fb23d24dd7d2729a;hp=aad4bb895980b476d20aab29be34e52d124583f2;hpb=6c96743ff6c65895e4b96523d0e3d05f6dc3cb01;p=jalview.git diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java index aad4bb8..473d8ab 100644 --- a/src/jalview/gui/Jalview2XML.java +++ b/src/jalview/gui/Jalview2XML.java @@ -20,6 +20,7 @@ */ package jalview.gui; +import jalview.analysis.Conservation; import jalview.api.FeatureColourI; import jalview.api.ViewStyleI; import jalview.api.structures.JalviewStructureDisplayI; @@ -3387,8 +3388,7 @@ public class Jalview2XML } if (jGroup.getConsThreshold() != 0) { - jalview.analysis.Conservation c = new jalview.analysis.Conservation( - "All", ResidueProperties.propHash, 3, + Conservation c = new Conservation("All", 3, sg.getSequences(null), 0, sg.getWidth() - 1); c.calculate(); c.verdict(false, 25);