X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalview2XML.java;h=47a8fafe6a8ad0a20c9591e765aeeb78741e723d;hb=2bd3c28fe234c6883bec5412db83a809ab8d1500;hp=7093a9ab7d61663c445d3fe762d8e2b545b4236f;hpb=8c9072337270d0e4c26c569346d5ba1f829e08d3;p=jalview.git diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java index 7093a9a..47a8faf 100644 --- a/src/jalview/gui/Jalview2XML.java +++ b/src/jalview/gui/Jalview2XML.java @@ -20,6 +20,7 @@ */ package jalview.gui; +import jalview.analysis.Conservation; import jalview.api.FeatureColourI; import jalview.api.ViewStyleI; import jalview.api.structures.JalviewStructureDisplayI; @@ -3389,8 +3390,7 @@ public class Jalview2XML } if (jGroup.getConsThreshold() != 0) { - jalview.analysis.Conservation c = new jalview.analysis.Conservation( - "All", ResidueProperties.propHash, 3, + Conservation c = new Conservation("All", 3, sg.getSequences(null), 0, sg.getWidth() - 1); c.calculate(); c.verdict(false, 25);