X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalview2XML.java;h=b8977c51fd5e2fc46c8844e6e4a012d2b42078ff;hb=674835f42bf25bf22ccc51d067c4dc16e0ab4601;hp=bfd97f03b7c0ec5235a91b091db2231dc6286780;hpb=1ccaed89cec493136eb0f5ac22f2942dd8ce9bb0;p=jalview.git

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
index bfd97f0..b8977c5 100755
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -682,16 +682,12 @@ public class Jalview2XML
     af.changeColour(af.viewport.getGlobalColourScheme());
     af.viewport.setColourAppliesToAllGroups(true);
 
-    System.out.println(view.getShowSequenceFeatures());
-
     if (view.getShowSequenceFeatures())
     {
-      ;
-    }
-
-    {
+      af.viewport.showSequenceFeatures = true;
       SequenceFeatureFetcher sft = new SequenceFeatureFetcher(al,
           af.alignPanel);
+       al.featuresAdded = true;
     }
 
     //LOAD TREES - THIS RELEASE ONLY ALLOWS 1 TREE