X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalview2XML.java;h=c7fa0908d76fe121c2c8e6c508089a4a13f09e94;hb=918c7b4a347bec48eb12646947a0086acb62a084;hp=8bbf735f5c9d3b367451c8bf24b6d8628b92b597;hpb=5d6b5f3f7afd7735e5953fdcb43ddda33da6e757;p=jalview.git

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
index 8bbf735..c7fa090 100644
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -3763,7 +3763,7 @@ public class Jalview2XML
            * sb.append(newres.substring(newres.length() - sq.getEnd() -
            * dsq.getEnd())); dsq.setEnd(sq.getEnd()); }
            */
-          dsq.setSequence(sb.toString());
+          dsq.setSequence(newres);
         }
         // TODO: merges will never happen if we 'know' we have the real dataset
         // sequence - this should be detected when id==dssid