X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalview2XML.java;h=e25930965fa87bb8ac14a34289f8753769e5e8ab;hb=d4361e0bc5b31c5c659edef5ec825dbdb0615571;hp=cb29ab5d309bae126ecbd5cbd99ebda06752b3b7;hpb=11a49ff3022aff104f294e3365659ef388b38015;p=jalview.git

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
index cb29ab5..e259309 100644
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -612,7 +612,8 @@ public class Jalview2XML
 
                 for (int smap = 0; smap < jmol.jmb.sequence[peid].length; smap++)
                 {
-                  if (jal.findIndex(jmol.jmb.sequence[peid][smap]) > -1)
+//                  if (jal.findIndex(jmol.jmb.sequence[peid][smap]) > -1)
+                  if (jds==jmol.jmb.sequence[peid][smap])
                   {
                     StructureState state = new StructureState();
                     state.setVisible(true);