X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalview2XML.java;h=e387967c324dc8707f7bd9c7bf9d9f74b9e1fe31;hb=8aad3aef094946912932ed50230a8e0b3610b2db;hp=993b4020f6033d52c5314106be287b632402f31e;hpb=d27f1ffddb3578acb603f4fa845eb499c11cde10;p=jalview.git

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
index 993b402..e387967 100755
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -207,6 +207,7 @@ public class Jalview2XML
                 features.setDescription(sf.getDescription());
                 features.setStatus(sf.getStatus());
                 features.setType(sf.getType());
+                features.setFeatureGroup(sf.getFeatureGroup());
                 jseq.addFeatures(features);
               }
             }
@@ -682,6 +683,7 @@ public class Jalview2XML
                   = new jalview.datamodel.SequenceFeature(features[f].getType(),
                   features[f].getDescription(), features[f].getStatus(),
                   features[f].getBegin(), features[f].getEnd());
+              sf.setFeatureGroup(features[f].getFeatureGroup());
               al.getSequenceAt(i).getDatasetSequence().addSequenceFeature(sf);
             }
           }
@@ -879,9 +881,8 @@ public class Jalview2XML
 
         if (view.getShowSequenceFeatures())
         {
-           af.featureSettings.setEnabled(true);
            af.viewport.showSequenceFeatures = true;
-           af.sequenceFeatures.setSelected(true);
+           af.showSeqFeatures.setSelected(true);
         }
 
         if(jms.getFeatureSettings()!=null)