X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FOverviewPanel.java;h=2933841e7706d6790ccd603753007df449f12a1a;hb=c1e82b5f51e05f64318bfc8eae4e85b58d1922b5;hp=714eec688ce9f2a27463b8b4ee7a25c071c7e934;hpb=1c5dc1d944711fe6b6fdf5ddee60806ac364f638;p=jalview.git

diff --git a/src/jalview/gui/OverviewPanel.java b/src/jalview/gui/OverviewPanel.java
index 714eec6..2933841 100755
--- a/src/jalview/gui/OverviewPanel.java
+++ b/src/jalview/gui/OverviewPanel.java
@@ -281,11 +281,9 @@ public class OverviewPanel extends JPanel implements Runnable
             seq = av.alignment.getHiddenSequences().getHiddenSequence(lastrow);
             if (seq == null)
             {
-
               int index =
                  av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(lastrow);
 
-
              seq = av.alignment.getSequenceAt(index);
             }
             else
@@ -319,7 +317,7 @@ public class OverviewPanel extends JPanel implements Runnable
                   seq, lastcol).getRGB();
 
               if (av.showSequenceFeatures)
-                color = fr.findFeatureColour(color, lastrow, lastcol);
+                color = fr.findFeatureColour(color, seq, lastcol);
             }
             else
             {