X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FOverviewPanel.java;h=609e010d0fc025dda71522db3cfc293da9e29293;hb=c6c94d2adb0d156345065b1a7e18e26c7b8dd2b8;hp=39a232a57c3ce4bfae1fa46ccd1623c9a23fd2bb;hpb=be32c14cd8e48fe0a207cd7030cb9cd46f894678;p=jalview.git

diff --git a/src/jalview/gui/OverviewPanel.java b/src/jalview/gui/OverviewPanel.java
index 39a232a..609e010 100755
--- a/src/jalview/gui/OverviewPanel.java
+++ b/src/jalview/gui/OverviewPanel.java
@@ -292,6 +292,8 @@ public class OverviewPanel extends JPanel implements Runnable
     int color = Color.white.getRGB();
     int row, col;
     jalview.datamodel.SequenceI seq;
+    final boolean hasHiddenRows = av.hasHiddenRows(), hasHiddenCols = av
+            .hasHiddenColumns();
     boolean hiddenRow = false;
     for (row = 0; row < sequencesHeight; row++)
     {
@@ -309,7 +311,7 @@ public class OverviewPanel extends JPanel implements Runnable
       lastrow = (int) (row * sampleRow);
 
       hiddenRow = false;
-      if (av.hasHiddenRows())
+      if (hasHiddenRows)
       {
         seq = av.getAlignment().getHiddenSequences()
                 .getHiddenSequence(lastrow);
@@ -362,7 +364,7 @@ public class OverviewPanel extends JPanel implements Runnable
         }
 
         if (hiddenRow
-                || (av.hasHiddenColumns() && !av.getColumnSelection()
+                || (hasHiddenCols && !av.getColumnSelection()
                         .isVisible(lastcol)))
         {
           color = new Color(color).darker().darker().getRGB();