X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FOverviewPanel.java;h=b3e3e66a73dc31d1cde3d803ea3ab61277db4f0f;hb=4a3def9f59cefe629c9a33d87483283aee085928;hp=6e453baaaa3f8b936d6ccf0e6cd9a8a166d9a89d;hpb=3eaeb80fba0225aa5c6123a4c512da569211dcfb;p=jalview.git diff --git a/src/jalview/gui/OverviewPanel.java b/src/jalview/gui/OverviewPanel.java index 6e453ba..b3e3e66 100755 --- a/src/jalview/gui/OverviewPanel.java +++ b/src/jalview/gui/OverviewPanel.java @@ -20,6 +20,7 @@ */ package jalview.gui; +import jalview.bin.Cache; import jalview.renderer.OverviewRenderer; import jalview.util.MessageManager; import jalview.util.Platform; @@ -39,8 +40,10 @@ import java.awt.event.MouseAdapter; import java.awt.event.MouseEvent; import java.awt.event.MouseMotionAdapter; import java.beans.PropertyChangeEvent; +import java.beans.PropertyVetoException; import javax.swing.JCheckBoxMenuItem; +import javax.swing.JInternalFrame; import javax.swing.JPanel; import javax.swing.JPopupMenu; import javax.swing.SwingUtilities; @@ -52,24 +55,25 @@ import javax.swing.SwingUtilities; * @author $author$ * @version $Revision$ */ -public class OverviewPanel extends JPanel implements Runnable, - ViewportListenerI +@SuppressWarnings("serial") +public class OverviewPanel extends JPanel + implements Runnable, ViewportListenerI { - private OverviewDimensions od; + protected OverviewDimensions od; private OverviewCanvas oviewCanvas; - private AlignViewport av; + protected AlignViewport av; private AlignmentPanel ap; - private JCheckBoxMenuItem displayToggle; + protected JCheckBoxMenuItem displayToggle; - private boolean showHidden = true; + protected boolean showHidden = true; - private boolean draggingBox = false; + protected boolean draggingBox = false; - private ProgressPanel progressPanel; + protected ProgressPanel progressPanel; /** * Creates a new OverviewPanel object. @@ -82,13 +86,24 @@ public class OverviewPanel extends JPanel implements Runnable, this.av = alPanel.av; this.ap = alPanel; - od = new OverviewDimensionsShowHidden(av.getRanges(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null)); + showHidden = Cache.getDefault(Preferences.SHOW_OV_HIDDEN_AT_START, + false); + if (showHidden) + { + od = new OverviewDimensionsShowHidden(av.getRanges(), + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); + } + else + { + od = new OverviewDimensionsHideHidden(av.getRanges(), + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); + } setLayout(new BorderLayout()); progressPanel = new ProgressPanel(OverviewRenderer.UPDATE, - MessageManager.getString("label.oview_calc")); + MessageManager.getString("label.oview_calc"), getWidth()); this.add(progressPanel, BorderLayout.SOUTH); oviewCanvas = new OverviewCanvas(od, av, progressPanel); @@ -140,15 +155,15 @@ public class OverviewPanel extends JPanel implements Runnable, { // set the mouse position as a fixed point in the box // and drag relative to that position - od.adjustViewportFromMouse(evt.getX(), - evt.getY(), av.getAlignment().getHiddenSequences(), + od.adjustViewportFromMouse(evt.getX(), evt.getY(), + av.getAlignment().getHiddenSequences(), av.getAlignment().getHiddenColumns()); } else { - od.updateViewportFromMouse(evt.getX(), evt.getY(), av - .getAlignment().getHiddenSequences(), av.getAlignment() - .getHiddenColumns()); + od.updateViewportFromMouse(evt.getX(), evt.getY(), + av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); } } } @@ -158,15 +173,21 @@ public class OverviewPanel extends JPanel implements Runnable, { if (od.isPositionInBox(evt.getX(), evt.getY())) { - // display drag cursor at mouse position - setCursor(Cursor.getPredefinedCursor(Cursor.MOVE_CURSOR)); + /* + * using HAND_CURSOR rather than DRAG_CURSOR + * as the latter is not supported on Mac + */ + getParent().setCursor( + Cursor.getPredefinedCursor(Cursor.HAND_CURSOR)); } else { // reset cursor - setCursor(Cursor.getPredefinedCursor(Cursor.DEFAULT_CURSOR)); + getParent().setCursor( + Cursor.getPredefinedCursor(Cursor.CROSSHAIR_CURSOR)); } } + }); addMouseListener(new MouseAdapter() @@ -174,40 +195,38 @@ public class OverviewPanel extends JPanel implements Runnable, @Override public void mousePressed(MouseEvent evt) { - if (SwingUtilities.isRightMouseButton(evt)) + + if (Platform.isWinRightButton(evt)) { - if (!Platform.isAMac()) - { - showPopupMenu(evt); - } + showPopupMenu(evt); + return; } - else + if (SwingUtilities.isRightMouseButton(evt)) { - if (!od.isPositionInBox(evt.getX(), evt.getY())) - { - // don't do anything if the mouse press is in the overview's box - // (wait to see if it's a drag instead) - // otherwise update the viewport - od.updateViewportFromMouse(evt.getX(), evt.getY(), - av.getAlignment().getHiddenSequences(), - av.getAlignment().getHiddenColumns()); - } - else - { - draggingBox = true; - od.setDragPoint(evt.getX(), evt.getY(), - av.getAlignment().getHiddenSequences(), - av.getAlignment().getHiddenColumns()); - } + return; } - } - - @Override - public void mouseReleased(MouseEvent evt) - { - if (draggingBox) + // don't do anything if the mouse press is in the overview's box + // (wait to see if it's a drag instead) + // otherwise update the viewport + if (!od.isPositionInBox(evt.getX(), evt.getY())) { draggingBox = false; + + // display drag cursor at mouse position + setCursor(Cursor.getPredefinedCursor(Cursor.MOVE_CURSOR)); + + od.updateViewportFromMouse(evt.getX(), evt.getY(), + av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); + getParent().setCursor( + Cursor.getPredefinedCursor(Cursor.HAND_CURSOR)); + } + else + { + draggingBox = true; + od.setDragPoint(evt.getX(), evt.getY(), + av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); } } @@ -219,13 +238,29 @@ public class OverviewPanel extends JPanel implements Runnable, showPopupMenu(evt); } } + + @Override + public void mouseReleased(MouseEvent evt) + { + draggingBox = false; + } + }); + + /* + * Javascript does not call componentResized on initial display, + * so do the update here + */ + if (Platform.isJS()) + { + updateOverviewImage(); + } } /* * Displays the popup menu and acts on user input */ - private void showPopupMenu(MouseEvent e) + protected void showPopupMenu(MouseEvent e) { JPopupMenu popup = new JPopupMenu(); ActionListener menuListener = new ActionListener() @@ -250,21 +285,21 @@ public class OverviewPanel extends JPanel implements Runnable, /* * Toggle overview display between showing hidden columns and hiding hidden columns */ - private void toggleHiddenColumns() + protected void toggleHiddenColumns() { if (showHidden) { showHidden = false; od = new OverviewDimensionsHideHidden(av.getRanges(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null)); + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); } else { showHidden = true; od = new OverviewDimensionsShowHidden(av.getRanges(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null)); + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); } oviewCanvas.resetOviewDims(od); updateOverviewImage(); @@ -289,7 +324,7 @@ public class OverviewPanel extends JPanel implements Runnable, od.setWidth(getWidth()); od.setHeight(getHeight() - progressPanel.getHeight()); } - + setPreferredSize(new Dimension(od.getWidth(), od.getHeight() + progressPanel.getHeight())); @@ -298,21 +333,23 @@ public class OverviewPanel extends JPanel implements Runnable, return; } - Thread thread = new Thread(this); + Thread thread = new Thread(this, "UpdateOverview"); thread.start(); repaint(); - } @Override public void run() { - oviewCanvas.draw(av.isShowSequenceFeatures(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null), ap - .getSeqPanel().seqCanvas.getFeatureRenderer()); - setBoxPosition(); + if (oviewCanvas != null) + { + oviewCanvas.draw(av.isShowSequenceFeatures(), + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null), + ap.getSeqPanel().seqCanvas.getFeatureRenderer()); + setBoxPosition(); + } } /** @@ -320,17 +357,36 @@ public class OverviewPanel extends JPanel implements Runnable, * changed * */ + private void setBoxPositionOnly() + { + if (od != null) + { + int oldX = od.getBoxX(); + int oldY = od.getBoxY(); + int oldWidth = od.getBoxWidth(); + int oldHeight = od.getBoxHeight(); + od.setBoxPosition(av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); + repaint(oldX - 1, oldY - 1, oldWidth + 2, oldHeight + 2); + repaint(od.getBoxX(), od.getBoxY(), od.getBoxWidth(), + od.getBoxHeight()); + } + } + private void setBoxPosition() { - od.setBoxPosition(av.getAlignment().getHiddenSequences(), av - .getAlignment().getHiddenColumns()); - repaint(); + if (od != null) + { + od.setBoxPosition(av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); + repaint(); + } } @Override public void propertyChange(PropertyChangeEvent evt) { - setBoxPosition(); + setBoxPositionOnly(); } /** @@ -340,7 +396,23 @@ public class OverviewPanel extends JPanel implements Runnable, { try { - av.getRanges().removePropertyChangeListener(this); + if (av != null) + { + av.getRanges().removePropertyChangeListener(this); + } + + oviewCanvas.dispose(); + + /* + * close the parent frame (which also removes it from the + * Desktop Windows menu) + */ + ((JInternalFrame) SwingUtilities + .getAncestorOfClass(JInternalFrame.class, (this))) + .setClosed(true); + } catch (PropertyVetoException e) + { + // ignore } finally { progressPanel = null;