X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FPCAPanel.java;h=26db8c3570d3c9e61b94a84eee8eaa6acaacae4c;hb=3b0aa1a072e9c18ce9b7040204584ce810803bb6;hp=c0c347a34799a849009d530e02fe6f7b6f895e0e;hpb=cb8e52fbbc5f725e3f7f48c672cdddb0690bd978;p=jalview.git diff --git a/src/jalview/gui/PCAPanel.java b/src/jalview/gui/PCAPanel.java index c0c347a..26db8c3 100644 --- a/src/jalview/gui/PCAPanel.java +++ b/src/jalview/gui/PCAPanel.java @@ -20,6 +20,23 @@ */ package jalview.gui; +import java.awt.BorderLayout; +import java.awt.Color; +import java.awt.Dimension; +import java.awt.Graphics; +import java.awt.event.ActionEvent; +import java.awt.event.ActionListener; +import java.awt.print.PageFormat; +import java.awt.print.Printable; +import java.awt.print.PrinterException; +import java.awt.print.PrinterJob; + +import javax.swing.ButtonGroup; +import javax.swing.JMenuItem; +import javax.swing.JRadioButtonMenuItem; +import javax.swing.event.InternalFrameAdapter; +import javax.swing.event.InternalFrameEvent; + import jalview.analysis.scoremodels.ScoreModels; import jalview.api.AlignViewportI; import jalview.api.analysis.ScoreModelI; @@ -39,23 +56,6 @@ import jalview.util.MessageManager; import jalview.viewmodel.AlignmentViewport; import jalview.viewmodel.PCAModel; -import java.awt.BorderLayout; -import java.awt.Color; -import java.awt.Dimension; -import java.awt.Graphics; -import java.awt.event.ActionEvent; -import java.awt.event.ActionListener; -import java.awt.print.PageFormat; -import java.awt.print.Printable; -import java.awt.print.PrinterException; -import java.awt.print.PrinterJob; - -import javax.swing.ButtonGroup; -import javax.swing.JMenuItem; -import javax.swing.JRadioButtonMenuItem; -import javax.swing.event.InternalFrameAdapter; -import javax.swing.event.InternalFrameEvent; - /** * The panel holding the Principal Component Analysis 3-D visualisation */ @@ -92,6 +92,7 @@ public class PCAPanel extends GPCAPanel SimilarityParamsI params) { super(); + this.setFrameIcon(null); this.av = alignPanel.av; this.ap = alignPanel; boolean nucleotide = av.getAlignment().isNucleotide(); @@ -122,8 +123,8 @@ public class PCAPanel extends GPCAPanel ScoreModelI scoreModel = ScoreModels.getInstance() .getScoreModel(modelName, ap); - setPcaModel(new PCAModel(seqstrings, seqs, nucleotide, scoreModel, - params)); + setPcaModel( + new PCAModel(seqstrings, seqs, nucleotide, scoreModel, params)); PaintRefresher.Register(this, av.getSequenceSetId()); setRotatableCanvas(new RotatableCanvas(alignPanel)); @@ -426,9 +427,9 @@ public class PCAPanel extends GPCAPanel @Override public void exportImage(Graphics g) throws Exception { - RotatableCanvas canvas = getRotatableCanvas(); - canvas.drawBackground(g); - canvas.drawScene(g); + RotatableCanvas canvas = getRotatableCanvas(); + canvas.drawBackground(g); + canvas.drawScene(g); if (canvas.drawAxes) { canvas.drawAxes(g); @@ -621,7 +622,8 @@ public class PCAPanel extends GPCAPanel final IProgressIndicatorHandler handler) { progressBar.registerHandler(id, handler); - // if (progressBarHandlers == null || !progressBars.contains(Long.valueOf(id))) + // if (progressBarHandlers == null || + // !progressBars.contains(Long.valueOf(id))) // { // throw new // Error(MessageManager.getString("error.call_setprogressbar_before_registering_handler"));