X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FPromptUserConfig.java;fp=src%2Fjalview%2Fgui%2FPromptUserConfig.java;h=cb594523893446e509dffbf6700f7ea3e341cd1e;hb=8f5e471f79fdd55b7dc397f942232cb036c14017;hp=6261015a72735a00b085f3829a21f9e85e376d24;hpb=004a35d07335854184fdd335920b7210eebd66d9;p=jalview.git

diff --git a/src/jalview/gui/PromptUserConfig.java b/src/jalview/gui/PromptUserConfig.java
index 6261015..cb59452 100644
--- a/src/jalview/gui/PromptUserConfig.java
+++ b/src/jalview/gui/PromptUserConfig.java
@@ -24,8 +24,6 @@ import jalview.bin.Cache;
 
 import java.awt.Component;
 
-import javax.swing.JOptionPane;
-
 public class PromptUserConfig implements Runnable
 {
   /**
@@ -120,6 +118,7 @@ public class PromptUserConfig implements Runnable
     this.allowCancel = allowCancel;
   }
 
+  @Override
   public void run()
   {
     if (property == null)
@@ -206,12 +205,7 @@ public class PromptUserConfig implements Runnable
               (allowCancel) ? JvOptionPane.YES_NO_CANCEL_OPTION
                       : JvOptionPane.YES_NO_OPTION,
               JvOptionPane.QUESTION_MESSAGE);
-      // now, ask the desktop to relayer any external windows that might have
-      // been obsured
-      if (Desktop.instance != null)
-      {
-        Desktop.instance.relayerWindows();
-      }
+
       // and finish parsing the result
       jalview.bin.Cache.log.debug("Got response : " + reply);
       if (reply == JvOptionPane.YES_OPTION)