X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FRotatableCanvas.java;h=263f0dca91f64f2c98650482a6e0c01aec90efe9;hb=a8f483d04205bb8273ee311c12968b7e86d205fa;hp=4611533875d73f36a24599f6cb538a50e20f00b1;hpb=94f7397e4369deba3ec5743f9d28c14566fdfad2;p=jalview.git diff --git a/src/jalview/gui/RotatableCanvas.java b/src/jalview/gui/RotatableCanvas.java index 4611533..263f0dc 100755 --- a/src/jalview/gui/RotatableCanvas.java +++ b/src/jalview/gui/RotatableCanvas.java @@ -1,31 +1,33 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4) - * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) + * Copyright (C) 2014 The Jalview Authors * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 - * of the License, or (at your option) any later version. + * This file is part of Jalview. * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA + * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.gui; import java.util.*; - import java.awt.*; import java.awt.event.*; + import javax.swing.*; +import jalview.api.RotatableCanvasI; import jalview.datamodel.*; import jalview.math.*; +import jalview.util.MessageManager; /** * DOCUMENT ME! @@ -34,7 +36,7 @@ import jalview.math.*; * @version $Revision$ */ public class RotatableCanvas extends JPanel implements MouseListener, - MouseMotionListener, KeyListener + MouseMotionListener, KeyListener, RotatableCanvasI { RotatableMatrix idmat = new RotatableMatrix(3, 3); @@ -139,14 +141,18 @@ public class RotatableCanvas extends JPanel implements MouseListener, repaint(); } + boolean first = true; + public void setPoints(Vector points, int npoint) { this.points = points; this.npoint = npoint; - ToolTipManager.sharedInstance().registerComponent(this); - ToolTipManager.sharedInstance().setInitialDelay(0); - ToolTipManager.sharedInstance().setDismissDelay(10000); - + if (first) + { + ToolTipManager.sharedInstance().registerComponent(this); + ToolTipManager.sharedInstance().setInitialDelay(0); + ToolTipManager.sharedInstance().setDismissDelay(10000); + } prefsize = getPreferredSize(); orig = new float[npoint][3]; @@ -187,11 +193,14 @@ public class RotatableCanvas extends JPanel implements MouseListener, findWidth(); scale = findScale(); + if (first) + { - addMouseListener(this); - - addMouseMotionListener(this); + addMouseListener(this); + addMouseMotionListener(this); + } + first = false; } public void initAxes() @@ -350,7 +359,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param g - * DOCUMENT ME! + * DOCUMENT ME! */ public void paintComponent(Graphics g1) { @@ -362,7 +371,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, if (points == null) { g.setFont(new Font("Verdana", Font.PLAIN, 18)); - g.drawString("Calculating PCA....", 20, getHeight() / 2); + g.drawString(MessageManager.getString("label.calculating_pca")+ "....", 20, getHeight() / 2); } else { @@ -396,7 +405,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param g - * DOCUMENT ME! + * DOCUMENT ME! */ public void drawAxes(Graphics g) { @@ -415,9 +424,9 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param g - * DOCUMENT ME! + * DOCUMENT ME! * @param col - * DOCUMENT ME! + * DOCUMENT ME! */ public void drawBackground(Graphics g, Color col) { @@ -429,7 +438,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param g - * DOCUMENT ME! + * DOCUMENT ME! */ public void drawScene(Graphics g1) { @@ -461,8 +470,8 @@ public class RotatableCanvas extends JPanel implements MouseListener, if (av.getSelectionGroup() != null) { - if (av.getSelectionGroup().getSequences(null).contains( - ((SequencePoint) points.elementAt(i)).sequence)) + if (av.getSelectionGroup().getSequences(null) + .contains(((SequencePoint) points.elementAt(i)).sequence)) { g.setColor(Color.gray); } @@ -477,8 +486,9 @@ public class RotatableCanvas extends JPanel implements MouseListener, if (showLabels) { g.setColor(Color.red); - g.drawString(((SequencePoint) points.elementAt(i)).sequence - .getName(), x - 3, y - 4); + g.drawString( + ((SequencePoint) points.elementAt(i)).sequence.getName(), + x - 3, y - 4); } } @@ -514,7 +524,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void keyTyped(KeyEvent evt) { @@ -524,7 +534,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void keyReleased(KeyEvent evt) { @@ -534,7 +544,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void keyPressed(KeyEvent evt) { @@ -565,7 +575,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void mouseClicked(MouseEvent evt) { @@ -575,7 +585,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void mouseEntered(MouseEvent evt) { @@ -585,7 +595,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void mouseExited(MouseEvent evt) { @@ -595,7 +605,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void mouseReleased(MouseEvent evt) { @@ -605,7 +615,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void mousePressed(MouseEvent evt) { @@ -644,7 +654,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, aps[a].av.setSelectionGroup(new SequenceGroup()); aps[a].av.getSelectionGroup().addOrRemove(found, true); aps[a].av.getSelectionGroup().setEndRes( - aps[a].av.alignment.getWidth() - 1); + aps[a].av.getAlignment().getWidth() - 1); } } PaintRefresher.Refresh(this, av.getSequenceSetId()); @@ -677,7 +687,7 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param evt - * DOCUMENT ME! + * DOCUMENT ME! */ public void mouseDragged(MouseEvent evt) { @@ -729,13 +739,13 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param x1 - * DOCUMENT ME! + * DOCUMENT ME! * @param y1 - * DOCUMENT ME! + * DOCUMENT ME! * @param x2 - * DOCUMENT ME! + * DOCUMENT ME! * @param y2 - * DOCUMENT ME! + * DOCUMENT ME! */ public void rectSelect(int x1, int y1, int x2, int y2) { @@ -749,8 +759,8 @@ public class RotatableCanvas extends JPanel implements MouseListener, { if (av != null) { - if (!av.getSelectionGroup().getSequences(null).contains( - sp.sequence)) + if (!av.getSelectionGroup().getSequences(null) + .contains(sp.sequence)) { av.getSelectionGroup().addSequence(sp.sequence, true); } @@ -767,9 +777,9 @@ public class RotatableCanvas extends JPanel implements MouseListener, * DOCUMENT ME! * * @param x - * DOCUMENT ME! + * DOCUMENT ME! * @param y - * DOCUMENT ME! + * DOCUMENT ME! * * @return DOCUMENT ME! */ @@ -816,4 +826,20 @@ public class RotatableCanvas extends JPanel implements MouseListener, { ap }; } } + + /** + * + * @return x,y,z positions of point s (index into points) under current + * transform. + */ + public double[] getPointPosition(int s) + { + double pts[] = new double[3]; + float[] p = ((SequencePoint) points.elementAt(s)).coord; + pts[0] = p[0]; + pts[1] = p[1]; + pts[2] = p[2]; + return pts; + } + }