X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FRotatableCanvas.java;h=bd036292bf787af6ca3f76a4c6649211f9939802;hb=b6c21705d61d1ddc18c421b41f529040f3e8a1d5;hp=90688d0767ca84af4f8dd9434e8ad5403ea54168;hpb=1ecf6419aba86993b3c223bf5ec0fa79427baf85;p=jalview.git

diff --git a/src/jalview/gui/RotatableCanvas.java b/src/jalview/gui/RotatableCanvas.java
index 90688d0..bd03629 100755
--- a/src/jalview/gui/RotatableCanvas.java
+++ b/src/jalview/gui/RotatableCanvas.java
@@ -284,23 +284,24 @@ public class RotatableCanvas extends JPanel implements MouseListener,
       int x = (int)((float)(sp.coord[0] - centre[0])*scale) + halfwidth;
       int y = (int)((float)(sp.coord[1] - centre[1])*scale) + halfheight;
       float z = sp.coord[1] - centre[2];
-      if (sp.sequence instanceof DrawableSequence) {
-        if (((DrawableSequence)sp.sequence).color == Color.black) {
+
+
+
+
+      if (sp.sequence.getColor() == Color.black)
           g.setColor(Color.white);
-        } else {
-          g.setColor(((DrawableSequence)sp.sequence).color);
-        }
-      } else {
-        g.setColor(Color.red);
-      }
-      if (av != null) {
-        if (av.getSelection().contains(((SequencePoint)points.elementAt(i)).sequence)) {
+      else
+          g.setColor(sp.sequence.getColor());
+
+
+      if (av != null)
+      {
+        if (av.getSelection().contains(((SequencePoint)points.elementAt(i)).sequence))
           g.setColor(Color.gray);
-        }
       }
-      if (z < 0) {
+      if (z < 0)
         g.setColor(g.getColor().darker());
-      }
+
 
       g.fillRect(x-3,y-3,6,6);
       g.setColor(Color.red);