X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSeqCanvas.java;h=9bd4a04a6eefc81312981739c083dae9012a42fe;hb=51728d3951398f9c12d7017c776953f17322cc68;hp=760ece0c6d00f11454d66f77c4ffc8309d5b0c94;hpb=37de9310bec3501cbc6381e0c3dcb282fcaad812;p=jalview.git

diff --git a/src/jalview/gui/SeqCanvas.java b/src/jalview/gui/SeqCanvas.java
index 760ece0..9bd4a04 100755
--- a/src/jalview/gui/SeqCanvas.java
+++ b/src/jalview/gui/SeqCanvas.java
@@ -21,7 +21,7 @@
 package jalview.gui;
 
 import jalview.datamodel.AlignmentI;
-import jalview.datamodel.SearchResults;
+import jalview.datamodel.SearchResultsI;
 import jalview.datamodel.SequenceGroup;
 import jalview.datamodel.SequenceI;
 import jalview.renderer.ScaleRenderer;
@@ -62,8 +62,6 @@ public class SeqCanvas extends JComponent
 
   AlignViewport av;
 
-  SearchResults searchResults = null;
-
   boolean fastPaint = false;
 
   int LABEL_WEST;
@@ -734,16 +732,17 @@ public class SeqCanvas extends JComponent
 
       if (av.isShowSequenceFeatures())
       {
-        fr.drawSequence(g, nextSeq, startRes, endRes, offset
+        fr.drawSequence(g, nextSeq, startRes,
+                endRes, offset
                 + ((i - startSeq) * charHeight));
       }
 
       // / Highlight search Results once all sequences have been drawn
       // ////////////////////////////////////////////////////////
-      if (searchResults != null)
+      if (av.hasSearchResults())
       {
-        int[] visibleResults = searchResults.getResults(nextSeq, startRes,
-                endRes);
+        int[] visibleResults = av.getSearchResults().getResults(nextSeq,
+                startRes, endRes);
         if (visibleResults != null)
         {
           for (int r = 0; r < visibleResults.length; r += 2)
@@ -965,11 +964,11 @@ public class SeqCanvas extends JComponent
    * @param results
    *          DOCUMENT ME!
    */
-  public void highlightSearchResults(SearchResults results)
+  public void highlightSearchResults(SearchResultsI results)
   {
     img = null;
 
-    searchResults = results;
+    av.setSearchResults(results);
 
     repaint();
   }