X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSeqPanel.java;h=4a1a9eec097617b1d989e137c18a2303e9086cdb;hb=7e00183505bd4c58d1ce62ee121ed372c3b058f2;hp=7abbd7d440a289204aa576e6ec579f0e9caeade5;hpb=bc18effe68ba80213a6d03ca7e6175adc6be71d6;p=jalview.git

diff --git a/src/jalview/gui/SeqPanel.java b/src/jalview/gui/SeqPanel.java
index 7abbd7d..4a1a9ee 100644
--- a/src/jalview/gui/SeqPanel.java
+++ b/src/jalview/gui/SeqPanel.java
@@ -49,6 +49,7 @@ import jalview.util.MappingUtils;
 import jalview.util.MessageManager;
 import jalview.util.Platform;
 import jalview.viewmodel.AlignmentViewport;
+import jalview.viewmodel.ViewportRanges;
 
 import java.awt.BorderLayout;
 import java.awt.Color;
@@ -742,13 +743,14 @@ public class SeqPanel extends JPanel
       return;
     }
 
-    if (!editingSeqs)
+    if (editingSeqs)
+    {
+      endEditing();
+    }
+    else
     {
       doMouseReleasedDefineMode(evt, didDrag);
-      return;
     }
-
-    endEditing();
   }
 
   /**
@@ -1325,9 +1327,9 @@ public class SeqPanel extends JPanel
     }
 
     mouseDragging = true;
-    if ((scrollThread != null) && (scrollThread.isRunning()))
+    if (scrollThread != null)
     {
-      scrollThread.setEvent(evt);
+      scrollThread.setMousePosition(evt.getPoint());
     }
   }
 
@@ -1898,10 +1900,10 @@ public class SeqPanel extends JPanel
   }
 
   /**
-   * DOCUMENT ME!
+   * On reentering the panel, stops any scrolling that was started on dragging
+   * out of the panel
    * 
    * @param e
-   *          DOCUMENT ME!
    */
   @Override
   public void mouseEntered(MouseEvent e)
@@ -1910,19 +1912,14 @@ public class SeqPanel extends JPanel
     {
       oldSeq = 0;
     }
-
-    if ((scrollThread != null) && (scrollThread.isRunning()))
-    {
-      scrollThread.stopScrolling();
-      scrollThread = null;
-    }
+    stopScrolling();
   }
 
   /**
-   * DOCUMENT ME!
+   * On leaving the panel, if the mouse is being dragged, starts a thread to
+   * scroll it until the mouse is released (in unwrapped mode only)
    * 
    * @param e
-   *          DOCUMENT ME!
    */
   @Override
   public void mouseExited(MouseEvent e)
@@ -2248,10 +2245,7 @@ public class SeqPanel extends JPanel
       return;
     }
 
-    if (res >= av.getAlignment().getWidth())
-    {
-      res = av.getAlignment().getWidth() - 1;
-    }
+    res = Math.min(res, av.getAlignment().getWidth()-1);
 
     if (stretchGroup.getEndRes() == res)
     {
@@ -2337,9 +2331,9 @@ public class SeqPanel extends JPanel
 
     mouseDragging = true;
 
-    if ((scrollThread != null) && (scrollThread.isRunning()))
+    if (scrollThread != null)
     {
-      scrollThread.setEvent(evt);
+      scrollThread.setMousePosition(evt.getPoint());
     }
 
     /*
@@ -2369,83 +2363,120 @@ public class SeqPanel extends JPanel
     ap.alignFrame.setStatus(status.toString());
   }
 
-  void scrollCanvas(MouseEvent evt)
+  /**
+   * Stops the scroll thread if it is running
+   */
+  void stopScrolling()
   {
-    if (evt == null)
+    if (scrollThread != null)
     {
-      if ((scrollThread != null) && (scrollThread.isRunning()))
-      {
-        scrollThread.stopScrolling();
-        scrollThread = null;
-      }
-      mouseDragging = false;
+      scrollThread.stopScrolling();
+      scrollThread = null;
     }
-    else
-    {
-      if (scrollThread == null)
-      {
-        scrollThread = new ScrollThread();
-      }
+    mouseDragging = false;
+  }
 
-      mouseDragging = true;
-      scrollThread.setEvent(evt);
+  /**
+   * Starts a thread to scroll the alignment, towards a given mouse position
+   * outside the panel bounds
+   * 
+   * @param mousePos
+   */
+  void startScrolling(Point mousePos)
+  {
+    if (scrollThread == null)
+    {
+      scrollThread = new ScrollThread();
     }
 
+    mouseDragging = true;
+    scrollThread.setMousePosition(mousePos);
   }
 
-  // this class allows scrolling off the bottom of the visible alignment
+  /**
+   * Performs scrolling of the visible alignment left, right, up or down
+   */
   class ScrollThread extends Thread
   {
-    MouseEvent evt;
+    private Point mousePos;
 
     private volatile boolean threadRunning = true;
 
+    /**
+     * Constructor
+     */
     public ScrollThread()
     {
+      setName("SeqPanel$ScrollThread");
       start();
     }
 
-    public void setEvent(MouseEvent e)
+    /**
+     * Sets the position of the mouse that determines the direction of the
+     * scroll to perform
+     * 
+     * @param p
+     */
+    public void setMousePosition(Point p)
     {
-      evt = e;
+      mousePos = p;
     }
 
+    /**
+     * Sets a flag that will cause the thread to exit
+     */
     public void stopScrolling()
     {
       threadRunning = false;
     }
 
-    public boolean isRunning()
-    {
-      return threadRunning;
-    }
-
+    /**
+     * Scrolls the alignment left or right, and/or up or down, depending on the
+     * last notified mouse position, until the limit of the alignment is
+     * reached, or a flag is set to stop the scroll
+     */
     @Override
     public void run()
     {
-      while (threadRunning)
+      while (threadRunning && mouseDragging)
       {
-        if (evt != null)
+        if (mousePos != null)
         {
-          if (mouseDragging && (evt.getY() < 0)
-                  && (av.getRanges().getStartSeq() > 0))
+          boolean scrolled = false;
+          ViewportRanges ranges = SeqPanel.this.av.getRanges();
+
+          /*
+           * scroll up or down
+           */
+          if (mousePos.y < 0)
           {
-            av.getRanges().scrollUp(true);
+            // mouse is above this panel - try scroll up
+            scrolled = ranges.scrollUp(true);
           }
-
-          if (mouseDragging && (evt.getY() >= getHeight()) && (av
-                  .getAlignment().getHeight() > av.getRanges().getEndSeq()))
+          else if (mousePos.y >= getHeight())
           {
-            av.getRanges().scrollUp(false);
+            // mouse is below this panel - try scroll down
+            scrolled = ranges.scrollUp(false);
           }
 
-          if (mouseDragging && (evt.getX() < 0))
+          /*
+           * scroll left or right
+           */
+          if (mousePos.x < 0)
           {
-            av.getRanges().scrollRight(false);
+            scrolled |= ranges.scrollRight(false);
           }
-          else if (mouseDragging && (evt.getX() >= getWidth()))
+          else if (mousePos.x >= getWidth())
           {
-            av.getRanges().scrollRight(true);
+            scrolled |= ranges.scrollRight(true);
+          }
+          if (!scrolled)
+          {
+            /*
+             * we have reached the limit of the visible alignment - quit
+             */
+            threadRunning = false;
+            SeqPanel.this.ap.repaint();
           }
         }