X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSeqPanel.java;h=55f06fce3e56ad2b7c606c8dd797eaad68262c7b;hb=320583fd2ac3ea714e6afdac050961978bd34c81;hp=6918811ea47740ac1fb032ceb853c4e527144614;hpb=4cf91ec17ae81e5f4be97aacfb171e70add999c3;p=jalview.git

diff --git a/src/jalview/gui/SeqPanel.java b/src/jalview/gui/SeqPanel.java
index 6918811..55f06fc 100644
--- a/src/jalview/gui/SeqPanel.java
+++ b/src/jalview/gui/SeqPanel.java
@@ -1184,7 +1184,7 @@ public class SeqPanel extends JPanel
     AlignmentAnnotation[] anns = av.getAlignment().getAlignmentAnnotation();
 
     String tooltip = AnnotationPanel.buildToolTip(anns[rowIndex], column,
-            anns, 0, av);
+            anns, 0, av, ap);
     if (tooltip == null ? tooltip != lastTooltip
             : !tooltip.equals(lastTooltip))
     {
@@ -2931,6 +2931,8 @@ public class SeqPanel extends JPanel
      * if hidden column selection has changed
      */
     ap.paintAlignment(hiddenChanged, hiddenChanged);
+    // propagate any selection changes
+    PaintRefresher.Refresh(ap, av.getSequenceSetId());
 
     return true;
   }