X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSplitFrame.java;h=08d6e030fe223aacce05f82486e00114f13fbd10;hb=078d3939810e3be7d0ed9452df7db6b29e7b8e70;hp=6d5bd34590abb553122245c3bf017dd0c47791e7;hpb=a2926674d871f1e06760b677c4cc3b171d72902b;p=jalview.git diff --git a/src/jalview/gui/SplitFrame.java b/src/jalview/gui/SplitFrame.java index 6d5bd34..08d6e03 100644 --- a/src/jalview/gui/SplitFrame.java +++ b/src/jalview/gui/SplitFrame.java @@ -20,24 +20,11 @@ */ package jalview.gui; -import jalview.api.AlignViewControllerGuiI; -import jalview.api.FeatureSettingsControllerI; -import jalview.api.SplitContainerI; -import jalview.controller.FeatureSettingsControllerGuiI; -import jalview.datamodel.AlignmentI; -import jalview.jbgui.GAlignFrame; -import jalview.jbgui.GSplitFrame; -import jalview.structure.StructureSelectionManager; -import jalview.util.MessageManager; -import jalview.util.Platform; -import jalview.viewmodel.AlignmentViewport; - +import java.awt.BorderLayout; import java.awt.Component; import java.awt.Dimension; import java.awt.event.ActionEvent; import java.awt.event.ActionListener; -import java.awt.event.FocusEvent; -import java.awt.event.FocusListener; import java.awt.event.KeyAdapter; import java.awt.event.KeyEvent; import java.awt.event.KeyListener; @@ -48,6 +35,7 @@ import java.util.Map.Entry; import javax.swing.AbstractAction; import javax.swing.InputMap; +import javax.swing.JButton; import javax.swing.JComponent; import javax.swing.JDesktopPane; import javax.swing.JInternalFrame; @@ -56,9 +44,23 @@ import javax.swing.JMenuItem; import javax.swing.JPanel; import javax.swing.JTabbedPane; import javax.swing.KeyStroke; +import javax.swing.event.ChangeEvent; +import javax.swing.event.ChangeListener; import javax.swing.event.InternalFrameAdapter; import javax.swing.event.InternalFrameEvent; +import jalview.api.AlignViewControllerGuiI; +import jalview.api.FeatureSettingsControllerI; +import jalview.api.SplitContainerI; +import jalview.controller.FeatureSettingsControllerGuiI; +import jalview.datamodel.AlignmentI; +import jalview.jbgui.GAlignFrame; +import jalview.jbgui.GSplitFrame; +import jalview.structure.StructureSelectionManager; +import jalview.util.MessageManager; +import jalview.util.Platform; +import jalview.viewmodel.AlignmentViewport; + /** * An internal frame on the desktop that hosts a horizontally split view of * linked DNA and Protein alignments. Additional views can be created in linked @@ -103,6 +105,7 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI */ protected void init() { + setFrameIcon(null); getTopFrame().setSplitFrame(this); getBottomFrame().setSplitFrame(this); getTopFrame().setVisible(true); @@ -115,9 +118,9 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI * estimate width and height of SplitFrame; this.getInsets() doesn't seem to * give the full additional size (a few pixels short) */ - int widthFudge = Platform.isAMac() ? MAC_INSETS_WIDTH + int widthFudge = Platform.isAMacAndNotJS() ? MAC_INSETS_WIDTH : WINDOWS_INSETS_WIDTH; - int heightFudge = Platform.isAMac() ? MAC_INSETS_HEIGHT + int heightFudge = Platform.isAMacAndNotJS() ? MAC_INSETS_HEIGHT : WINDOWS_INSETS_HEIGHT; int width = ((AlignFrame) getTopFrame()).getWidth() + widthFudge; int height = ((AlignFrame) getTopFrame()).getHeight() @@ -178,26 +181,21 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI */ public void adjustLayout() { + final AlignViewport topViewport = ((AlignFrame) getTopFrame()).viewport; + final AlignViewport bottomViewport = ((AlignFrame) getBottomFrame()).viewport; + /* * Ensure sequence ids are the same width so sequences line up */ - int w1 = ((AlignFrame) getTopFrame()).getViewport().getIdWidth(); - int w2 = ((AlignFrame) getBottomFrame()).getViewport().getIdWidth(); + int w1 = topViewport.getIdWidth(); + int w2 = bottomViewport.getIdWidth(); int w3 = Math.max(w1, w2); - if (w1 != w3) - { - ((AlignFrame) getTopFrame()).getViewport().setIdWidth(w3); - } - if (w2 != w3) - { - ((AlignFrame) getBottomFrame()).getViewport().setIdWidth(w3); - } + topViewport.setIdWidth(w3); + bottomViewport.setIdWidth(w3); /* * Scale protein to either 1 or 3 times character width of dna */ - final AlignViewport topViewport = ((AlignFrame) getTopFrame()).viewport; - final AlignViewport bottomViewport = ((AlignFrame) getBottomFrame()).viewport; final AlignmentI topAlignment = topViewport.getAlignment(); final AlignmentI bottomAlignment = bottomViewport.getAlignment(); AlignmentViewport cdna = topAlignment.isNucleotide() ? topViewport @@ -262,8 +260,8 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI * calculate the maximum ratio that leaves at least the height * of two sequences (after rounding) visible in the bottom panel */ - int bottomSequencesHeight = bottomFrame.alignPanel.getSeqPanel().seqCanvas - .getHeight(); + int bottomSequencesHeight = bottomFrame.alignPanel + .getSeqPanel().seqCanvas.getHeight(); int bottomPanelMinHeight = bottomPanelHeight - Math.max(0, bottomSequencesHeight - 3 * bottomCharHeight); double maxRatio = (totalHeight - bottomPanelMinHeight) / totalHeight; @@ -271,7 +269,7 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI /* * estimate ratio of (topFrameContent / bottomFrameContent) */ - int insets = Platform.isAMac() ? MAC_INSETS_HEIGHT + int insets = Platform.isAMacAndNotJS() ? MAC_INSETS_HEIGHT : WINDOWS_INSETS_HEIGHT; // allow 3 'rows' for scale, scrollbar, status bar int topHeight = insets + (3 + topCount) * topCharHeight @@ -430,7 +428,9 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI * Ctrl-W / Cmd-W - close view or window */ KeyStroke key_cmdW = KeyStroke.getKeyStroke(KeyEvent.VK_W, - jalview.util.ShortcutKeyMaskExWrapper.getMenuShortcutKeyMaskEx(), false); + jalview.util.ShortcutKeyMaskExWrapper + .getMenuShortcutKeyMaskEx(), + false); action = new AbstractAction() { @Override @@ -451,7 +451,9 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI * Ctrl-T / Cmd-T open new view */ KeyStroke key_cmdT = KeyStroke.getKeyStroke(KeyEvent.VK_T, - jalview.util.ShortcutKeyMaskExWrapper.getMenuShortcutKeyMaskEx(), false); + jalview.util.ShortcutKeyMaskExWrapper + .getMenuShortcutKeyMaskEx(), + false); AbstractAction action = new AbstractAction() { @Override @@ -807,7 +809,9 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI * Ctrl-F / Cmd-F open Finder dialog, 'focused' on the right alignment */ KeyStroke key_cmdF = KeyStroke.getKeyStroke(KeyEvent.VK_F, - jalview.util.ShortcutKeyMaskExWrapper.getMenuShortcutKeyMaskEx(), false); + jalview.util.ShortcutKeyMaskExWrapper + .getMenuShortcutKeyMaskEx(), + false); AbstractAction action = new AbstractAction() { @Override @@ -817,7 +821,11 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI if (c != null && c instanceof AlignFrame) { AlignFrame af = (AlignFrame) c; - new Finder(af.viewport, af.alignPanel); + boolean dna = af.getViewport().getAlignment().isNucleotide(); + String scope = MessageManager.getString("label.in") + " " + + (dna ? MessageManager.getString("label.nucleotide") + : MessageManager.getString("label.protein")); + new Finder(af.alignPanel, true, scope); } } }; @@ -850,7 +858,8 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI } /** - * holds the frame for feature settings, so Protein and DNA tabs can be managed + * holds the frame for feature settings, so Protein and DNA tabs can be + * managed */ JInternalFrame featureSettingsUI; @@ -861,37 +870,88 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI FeatureSettingsControllerGuiI featureSettings) { boolean showInternalFrame = false; - if (featureSettingsUI == null) + if (featureSettingsUI == null || featureSettingsPanels == null) { showInternalFrame = true; featureSettingsPanels = new JTabbedPane(); - featureSettingsUI = new JInternalFrame( - "Feature Settings for CDS and Protein Views"); - featureSettingsPanels.setOpaque(true); - featureSettingsUI.setContentPane(featureSettingsPanels); - JPanel dummyDNA = new JPanel(),dummyProtein=new JPanel(); - FocusListener fl1 = new FocusListener() + featureSettingsPanels.addChangeListener(new ChangeListener() { @Override - public void focusLost(FocusEvent e) + public void stateChanged(ChangeEvent e) { - // TODO Auto-generated method stub + if (e.getSource() != featureSettingsPanels + || featureSettingsUI == null + || featureSettingsUI.isClosed() + || !featureSettingsUI.isVisible()) + { + // not our tabbed pane + return; + } + int tab = featureSettingsPanels.getSelectedIndex(); + if (tab < 0 || featureSettingsPanels + .getSelectedComponent() instanceof FeatureSettingsControllerGuiI) + { + // no tab selected or already showing a feature settings GUI + return; + } + getAlignFrames().get(tab).showFeatureSettingsUI(); + } + }); + featureSettingsUI = new JInternalFrame(MessageManager.getString( + "label.sequence_feature_settings_for_CDS_and_Protein")); + featureSettingsPanels.setOpaque(true); + + JPanel dialog = new JPanel(); + dialog.setOpaque(true); + dialog.setLayout(new BorderLayout()); + dialog.add(featureSettingsPanels, BorderLayout.CENTER); + JPanel buttons = new JPanel(); + JButton ok = new JButton(MessageManager.getString("action.ok")); + ok.addActionListener(new ActionListener() + { + @Override + public void actionPerformed(ActionEvent e) + { + try + { + featureSettingsUI.setClosed(true); + } catch (PropertyVetoException pv) + { + pv.printStackTrace(); + } } + }); + JButton cancel = new JButton( + MessageManager.getString("action.cancel")); + cancel.addActionListener(new ActionListener() + { @Override - public void focusGained(FocusEvent e) + public void actionPerformed(ActionEvent e) { - int tab = featureSettingsPanels.getSelectedIndex(); - getAlignFrames().get(tab).showFeatureSettingsUI(); + try + { + for (Component fspanel : featureSettingsPanels.getComponents()) + { + if (fspanel instanceof FeatureSettingsControllerGuiI) + { + ((FeatureSettingsControllerGuiI) fspanel).revert(); + } + } + featureSettingsUI.setClosed(true); + } catch (Exception pv) + { + pv.printStackTrace(); + } } - }; - dummyDNA.addFocusListener(fl1); - dummyProtein.addFocusListener(fl1); - - featureSettingsPanels.addTab("CDS", dummyDNA); - featureSettingsPanels.addTab("Protein", dummyProtein); + }); + buttons.add(ok); + buttons.add(cancel); + dialog.add(buttons, BorderLayout.SOUTH); + featureSettingsUI.setContentPane(dialog); + createDummyTabs(); } if (featureSettingsPanels .indexOfTabComponent((Component) featureSettings) > -1) @@ -907,32 +967,40 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI if (pos == 0) { featureSettingsPanels.removeTabAt(0); - featureSettingsPanels.insertTab("CDS", null, - (Component) featureSettings, "Feature Settings for DNA CDS", + featureSettingsPanels.insertTab(tabName[0], null, + (Component) featureSettings, + MessageManager.formatMessage( + "label.sequence_feature_settings_for", tabName[0]), 0); } if (pos == 1) { featureSettingsPanels.removeTabAt(1); - featureSettingsPanels.insertTab("Protein", null, - (Component) featureSettings, "Feature Settings for Protein", + featureSettingsPanels.insertTab(tabName[1], null, + (Component) featureSettings, + MessageManager.formatMessage( + "label.sequence_feature_settings_for", tabName[1]), 1); } featureSettingsPanels.setSelectedComponent((Component) featureSettings); + + // TODO: JAL-3535 - construct a feature settings title including names of + // currently selected CDS and Protein names + if (showInternalFrame) { - if (Platform.isAMac()) + if (Platform.isAMacAndNotJS()) { Desktop.addInternalFrame(featureSettingsUI, MessageManager.getString( - "Feature Settings for CDS and Protein Views"), + "label.sequence_feature_settings_for_CDS_and_Protein"), 600, 480); } else { Desktop.addInternalFrame(featureSettingsUI, MessageManager.getString( - "Feature Settings for CDS and Protein Views"), + "label.sequence_feature_settings_for_CDS_and_Protein"), 600, 450); } featureSettingsUI @@ -953,7 +1021,7 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI if (fsettings != null) { featureSettingsPanels.removeTabAt(tab); - fsettings.closeFeatureSettings(); + fsettings.featureSettings_isClosed(); } else { @@ -961,25 +1029,87 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI } } featureSettingsPanels = null; + featureSettingsUI = null; }; }); featureSettingsUI.setLayer(JLayeredPane.PALETTE_LAYER); } } + /** + * tab names for feature settings + */ + private String[] tabName = new String[] { + MessageManager.getString("label.CDS"), + MessageManager.getString("label.protein") }; + + /** + * create placeholder tabs which materialise the feature settings for a given + * view. Also reinitialises any tabs containing stale feature settings + */ + private void createDummyTabs() + { + for (int tabIndex = 0; tabIndex < 2; tabIndex++) + { + JPanel dummyTab = new JPanel(); + featureSettingsPanels.addTab(tabName[tabIndex], dummyTab); + } + } + + private void replaceWithDummyTab(FeatureSettingsControllerI toClose) + { + Component dummyTab = null; + for (int tabIndex = 0; tabIndex < 2; tabIndex++) + { + if (featureSettingsPanels.getTabCount() > tabIndex) + { + dummyTab = featureSettingsPanels.getTabComponentAt(tabIndex); + if (dummyTab instanceof FeatureSettingsControllerGuiI + && !dummyTab.isVisible()) + { + featureSettingsPanels.removeTabAt(tabIndex); + // close the feature Settings tab + ((FeatureSettingsControllerGuiI) dummyTab) + .featureSettings_isClosed(); + // create a dummy tab in its place + dummyTab = new JPanel(); + featureSettingsPanels.insertTab(tabName[tabIndex], null, dummyTab, + MessageManager.formatMessage( + "label.sequence_feature_settings_for", + tabName[tabIndex]), + tabIndex); + } + } + } + } + @Override public void closeFeatureSettings( - FeatureSettingsControllerI featureSettings) + FeatureSettingsControllerI featureSettings, + boolean closeContainingFrame) { if (featureSettingsUI != null) { - try + if (closeContainingFrame) { - featureSettingsUI.setClosed(true); - } catch (Exception x) + try + { + featureSettingsUI.setClosed(true); + } catch (Exception x) + { + } + featureSettingsUI = null; + } + else { + replaceWithDummyTab(featureSettings); } - featureSettingsUI = null; } } + + @Override + public boolean isFeatureSettingsOpen() + { + return featureSettingsUI != null && !featureSettingsUI.isClosed(); + } } \ No newline at end of file