X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSplitFrame.java;h=0c8362589cad0293fdfbca26941806f16880157e;hb=d043ce47fc710d3eb2629ba926a8a7417bd67d8c;hp=953755f80a6a4d00eb29deb54fbfce6f12cbf584;hpb=ae737f35e5185aa421563e4c061340a3c4152514;p=jalview.git

diff --git a/src/jalview/gui/SplitFrame.java b/src/jalview/gui/SplitFrame.java
index 953755f..0c83625 100644
--- a/src/jalview/gui/SplitFrame.java
+++ b/src/jalview/gui/SplitFrame.java
@@ -20,6 +20,18 @@
  */
 package jalview.gui;
 
+import jalview.api.AlignViewportI;
+import jalview.api.AlignViewControllerGuiI;
+import jalview.api.FeatureSettingsControllerI;
+import jalview.api.SplitContainerI;
+import jalview.controller.FeatureSettingsControllerGuiI;
+import jalview.datamodel.AlignmentI;
+import jalview.jbgui.GAlignFrame;
+import jalview.jbgui.GSplitFrame;
+import jalview.structure.StructureSelectionManager;
+import jalview.util.MessageManager;
+import jalview.util.Platform;
+import jalview.viewmodel.AlignmentViewport;
 import java.awt.BorderLayout;
 import java.awt.Component;
 import java.awt.Dimension;
@@ -49,17 +61,6 @@ import javax.swing.event.ChangeListener;
 import javax.swing.event.InternalFrameAdapter;
 import javax.swing.event.InternalFrameEvent;
 
-import jalview.api.AlignViewControllerGuiI;
-import jalview.api.FeatureSettingsControllerI;
-import jalview.api.SplitContainerI;
-import jalview.controller.FeatureSettingsControllerGuiI;
-import jalview.datamodel.AlignmentI;
-import jalview.jbgui.GAlignFrame;
-import jalview.jbgui.GSplitFrame;
-import jalview.structure.StructureSelectionManager;
-import jalview.util.MessageManager;
-import jalview.util.Platform;
-import jalview.viewmodel.AlignmentViewport;
 
 /**
  * An internal frame on the desktop that hosts a horizontally split view of
@@ -230,8 +231,8 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
     topFrame.alignPanel.adjustAnnotationHeight();
     bottomFrame.alignPanel.adjustAnnotationHeight();
 
-    final AlignViewport topViewport = topFrame.viewport;
-    final AlignViewport bottomViewport = bottomFrame.viewport;
+    final AlignViewportI topViewport = topFrame.viewport;
+    final AlignViewportI bottomViewport = bottomFrame.viewport;
     final AlignmentI topAlignment = topViewport.getAlignment();
     final AlignmentI bottomAlignment = bottomViewport.getAlignment();
     boolean topAnnotations = topViewport.isShowAnnotation();
@@ -814,7 +815,11 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
         if (c != null && c instanceof AlignFrame)
         {
           AlignFrame af = (AlignFrame) c;
-          new Finder(af.viewport, af.alignPanel);
+          boolean dna = af.getViewport().getAlignment().isNucleotide();
+          String scope = MessageManager.getString("label.in") + " "
+                  + (dna ? MessageManager.getString("label.nucleotide")
+                          : MessageManager.getString("label.protein"));
+          new Finder(af.alignPanel, true, scope);
         }
       }
     };
@@ -1100,4 +1105,4 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
   {
     return featureSettingsUI != null && !featureSettingsUI.isClosed();
   }
-}
\ No newline at end of file
+}