X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSplitFrame.java;h=56d1fac324db1f2770cac06d86bbf09b2b95d8a0;hb=499fbdac5e7260dcfd51456e0b7eb1dd7ff613b5;hp=c23ed7cf92ca06ff09a5b70323ede68963304216;hpb=68f3676bed58ab5f4fdfbd71dcaf4e1ed61d380f;p=jalview.git

diff --git a/src/jalview/gui/SplitFrame.java b/src/jalview/gui/SplitFrame.java
index c23ed7c..56d1fac 100644
--- a/src/jalview/gui/SplitFrame.java
+++ b/src/jalview/gui/SplitFrame.java
@@ -20,6 +20,7 @@
  */
 package jalview.gui;
 
+import jalview.api.AlignViewportI;
 import jalview.api.SplitContainerI;
 import jalview.datamodel.AlignmentI;
 import jalview.jbgui.GAlignFrame;
@@ -194,12 +195,16 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
   }
 
   /**
-   * Adjust the divider for a sensible split of the real estate (for example,
+   * Adjusts the divider for a sensible split of the real estate (for example,
    * when many transcripts are shown with a single protein). This should only be
    * called after the split pane has been laid out (made visible) so it has a
-   * height.
+   * height. The aim is to avoid unnecessary vertical scroll bars, while
+   * ensuring that at least 2 sequences are visible in each panel.
+   * <p>
+   * Once laid out, the user may choose to customise as they wish, so this
+   * method is not called again after the initial layout.
    */
-  protected void adjustDivider()
+  protected void adjustInitialLayout()
   {
     AlignFrame topFrame = (AlignFrame) getTopFrame();
     AlignFrame bottomFrame = (AlignFrame) getBottomFrame();
@@ -211,8 +216,8 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
     topFrame.alignPanel.adjustAnnotationHeight();
     bottomFrame.alignPanel.adjustAnnotationHeight();
 
-    final AlignViewport topViewport = topFrame.viewport;
-    final AlignViewport bottomViewport = bottomFrame.viewport;
+    final AlignViewportI topViewport = topFrame.viewport;
+    final AlignViewportI bottomViewport = bottomFrame.viewport;
     final AlignmentI topAlignment = topViewport.getAlignment();
     final AlignmentI bottomAlignment = bottomViewport.getAlignment();
     boolean topAnnotations = topViewport.isShowAnnotation();
@@ -224,30 +229,26 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
     int bottomCharHeight = bottomViewport.getViewStyle().getCharHeight();
 
     /*
-     * calculate the minimum ratio that leaves at least 
-     * two sequences visible in the top panel
+     * calculate the minimum ratio that leaves at least the height 
+     * of two sequences (after rounding) visible in the top panel
      */
     int topPanelHeight = topFrame.getHeight();
     int bottomPanelHeight = bottomFrame.getHeight();
     int topSequencesHeight = topFrame.alignPanel.getSeqPanel().seqCanvas
             .getHeight();
     int topPanelMinHeight = topPanelHeight
-            - Math.max(0,
-                    topSequencesHeight - 2 * topViewport.getCharHeight());
+            - Math.max(0, topSequencesHeight - 3 * topCharHeight);
     double totalHeight = (double) topPanelHeight + bottomPanelHeight;
     double minRatio = topPanelMinHeight / totalHeight;
 
     /*
-     * calculate the maximum ratio that leaves at least 
-     * two sequences visible in the bottom panel
+     * calculate the maximum ratio that leaves at least the height 
+     * of two sequences (after rounding) visible in the bottom panel
      */
     int bottomSequencesHeight = bottomFrame.alignPanel.getSeqPanel().seqCanvas
             .getHeight();
     int bottomPanelMinHeight = bottomPanelHeight
-            - Math.max(
-                    0,
-                    bottomSequencesHeight - 2
-                            * bottomViewport.getCharHeight());
+            - Math.max(0, bottomSequencesHeight - 3 * bottomCharHeight);
     double maxRatio = (totalHeight - bottomPanelMinHeight) / totalHeight;
 
     /*
@@ -268,7 +269,7 @@ public class SplitFrame extends GSplitFrame implements SplitContainerI
      */
     ratio = Math.min(ratio, maxRatio);
     ratio = Math.max(ratio, minRatio);
-    // setRelativeDividerLocation(ratio);
+    setRelativeDividerLocation(ratio);
   }
 
   /**