X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FStructureChooser.java;h=3d80f797e77e78705a8bdd3ca517754bc92ce951;hb=6b8f46dd2ffc7f73948f0523c9b45336d2bd8128;hp=426f092244fbcddda7d99d408100a8551186d9d0;hpb=85246904e92e140d75830e191e7eb3e4467dac06;p=jalview.git diff --git a/src/jalview/gui/StructureChooser.java b/src/jalview/gui/StructureChooser.java index 426f092..3d80f79 100644 --- a/src/jalview/gui/StructureChooser.java +++ b/src/jalview/gui/StructureChooser.java @@ -533,8 +533,6 @@ public class StructureChooser extends GStructureChooser implements { cmb_filterOption.addItem(new FilterOption("Best Quality", "overall_quality", VIEWS_FILTER)); - cmb_filterOption.addItem(new FilterOption("Most UniProt Coverage", - "uniprot_coverage", VIEWS_FILTER)); cmb_filterOption.addItem(new FilterOption("Best Resolution", "resolution", VIEWS_FILTER)); cmb_filterOption.addItem(new FilterOption("Most Protein Chain", @@ -859,7 +857,8 @@ public class StructureChooser extends GStructureChooser implements final PDBEntry[] pdbEntriesToView, final AlignmentPanel alignPanel, SequenceI[] sequences) { - ssm.setProgressBar("Launching PDB structure viewer.."); + ssm.setProgressBar(MessageManager + .getString("status.launching_3d_structure_viewer")); final StructureViewer sViewer = new StructureViewer(ssm); if (SiftsSettings.isMapWithSifts()) @@ -877,9 +876,9 @@ public class StructureChooser extends GStructureChooser implements { int y = seqsWithoutSourceDBRef.size(); ssm.setProgressBar(null); - ssm.setProgressBar("Fetching db refs for " + y - + " sequence" + (y > 1 ? "s" : "") - + " without valid db ref required for SIFTS mapping"); + ssm.setProgressBar(MessageManager.formatMessage( + "status.fetching_dbrefs_for_sequences_without_valid_refs", + y)); SequenceI[] seqWithoutSrcDBRef = new SequenceI[y]; int x = 0; for (SequenceI fSeq : seqsWithoutSourceDBRef) @@ -898,14 +897,16 @@ public class StructureChooser extends GStructureChooser implements } SequenceI[][] collatedSeqs = seqsMap.toArray(new SequenceI[0][0]); ssm.setProgressBar(null); - ssm.setProgressBar("Fetching PDB Structures for selected entries.."); + ssm.setProgressBar(MessageManager + .getString("status.fetching_3d_structures_for_selected_entries")); sViewer.viewStructures(pdbEntriesToView, collatedSeqs, alignPanel); } else { ssm.setProgressBar(null); - ssm.setProgressBar("Fetching PDB Structure for " - + pdbEntriesToView[0].getId()); + ssm.setProgressBar(MessageManager.formatMessage( + "status.fetching_3d_structures_for", + pdbEntriesToView[0].getId())); sViewer.viewStructures(pdbEntriesToView[0], sequences, alignPanel); } }