X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FStructureViewerBase.java;h=418a84d87b7f0e3d49bd1e9a8c99c1dde34c3a60;hb=0bc9297afd18a3e2b412364bf1af426570555b9a;hp=840dbae06e19ca91634e08897cf89a11f78fb218;hpb=d156987a513b1da92fd6fbf7678b4a8e7ffc8d08;p=jalview.git

diff --git a/src/jalview/gui/StructureViewerBase.java b/src/jalview/gui/StructureViewerBase.java
index 840dbae..418a84d 100644
--- a/src/jalview/gui/StructureViewerBase.java
+++ b/src/jalview/gui/StructureViewerBase.java
@@ -27,6 +27,7 @@ import jalview.datamodel.AlignmentI;
 import jalview.datamodel.HiddenColumns;
 import jalview.datamodel.PDBEntry;
 import jalview.datamodel.SequenceI;
+import jalview.gui.JalviewColourChooser.ColourChooserListener;
 import jalview.gui.StructureViewer.ViewerType;
 import jalview.gui.ViewSelectionMenu.ViewSetProvider;
 import jalview.io.DataSourceType;
@@ -57,7 +58,6 @@ import java.util.Vector;
 
 import javax.swing.ButtonGroup;
 import javax.swing.JCheckBoxMenuItem;
-import javax.swing.JColorChooser;
 import javax.swing.JMenu;
 import javax.swing.JMenuItem;
 import javax.swing.JRadioButtonMenuItem;
@@ -564,7 +564,8 @@ public abstract class StructureViewerBase extends GStructureViewer
   {
     AlignmentI al = getAlignmentPanel().av.getAlignment();
     ColourSchemeI cs = ColourSchemes.getInstance()
-            .getColourScheme(colourSchemeName, al, null);
+            .getColourScheme(colourSchemeName, getAlignmentPanel().av, al,
+                    null);
     getBinding().setJalviewColourScheme(cs);
   }
 
@@ -809,16 +810,23 @@ public abstract class StructureViewerBase extends GStructureViewer
     return reply;
   }
 
+  /**
+   * Opens a colour chooser dialog, and applies the chosen colour to the
+   * background of the structure viewer
+   */
   @Override
   public void background_actionPerformed(ActionEvent actionEvent)
   {
-    Color col = JColorChooser.showDialog(this,
-            MessageManager.getString("label.select_background_colour"),
-            null);
-    if (col != null)
+    String ttl = MessageManager.getString("label.select_background_colour");
+    ColourChooserListener listener = new ColourChooserListener()
     {
-      getBinding().setBackgroundColour(col);
-    }
+      @Override
+      public void colourSelected(Color c)
+      {
+        getBinding().setBackgroundColour(c);
+      }
+    };
+    JalviewColourChooser.showColourChooser(this, ttl, null, listener);
   }
 
   @Override
@@ -876,6 +884,7 @@ public abstract class StructureViewerBase extends GStructureViewer
   @Override
   public void pdbFile_actionPerformed(ActionEvent actionEvent)
   {
+    // TODO: JAL-3048 not needed for Jalview-JS - save PDB file
     JalviewFileChooser chooser = new JalviewFileChooser(
             Cache.getProperty("LAST_DIRECTORY"));
 
@@ -1034,4 +1043,10 @@ public abstract class StructureViewerBase extends GStructureViewer
     return seqColoursApplied;
   }
 
+  @Override
+  public void raiseViewer()
+  {
+    toFront();
+  }
+
 }