X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FTreeCanvas.java;h=d921ba439e48a0cdec9a457ab95f8186028c0fd0;hb=4663ab6ec8142df859d031bff618d78809e22082;hp=c5650f5a973013c65c436c11991d76b7bd60a390;hpb=c5e9e6987402a15dc3a58e9d5e4d54be6760ef79;p=jalview.git

diff --git a/src/jalview/gui/TreeCanvas.java b/src/jalview/gui/TreeCanvas.java
index c5650f5..d921ba4 100755
--- a/src/jalview/gui/TreeCanvas.java
+++ b/src/jalview/gui/TreeCanvas.java
@@ -916,7 +916,7 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
         if (cs != null)
         {
           cs.setThreshold(av.getGlobalColourScheme().getThreshold(),
-                  av.getIgnoreGapsConsensus());
+                  av.isIgnoreGapsConsensus());
         }
       }
       sg.cs = cs;